RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W ARP5P53946 755 aa4.5□□□□□ -1.69
HSP42YDR171W APM1Q00776 475 aaPredicted RBP4.5□□□□□ -1.69
HSP42YDR171W ACS1Q01574 713 aa4.5□□□□□ -1.69
HSP42YDR171W WAR1Q03631 944 aa4.5□□□□□ -1.69
HSP42YDR171W YPL225WQ08971 146 aaKnown RBP4.5□□□□□ -1.69
HSP42YDR171W NCB2Q92317 146 aa4.5□□□□□ -1.69
HSP42YDR171W PDR18P53756 1333 aa4.49□□□□□ -1.69
HSP42YDR171W TY4B-HP0C2J7 1802 aa4.49□□□□□ -1.69
HSP42YDR171W TY4B-JP47024 1803 aa4.49□□□□□ -1.69
HSP42YDR171W RPN13O13563 156 aa4.49□□□□□ -1.69
HSP42YDR171W MRP7P12687 371 aa4.49□□□□□ -1.69
HSP42YDR171W BET2P20133 325 aa4.49□□□□□ -1.69
HSP42YDR171W UBC1P21734 215 aaKnown RBP4.49□□□□□ -1.69
HSP42YDR171W PEX2P32800 271 aa4.49□□□□□ -1.69
HSP42YDR171W NFU1P32860 256 aa4.49□□□□□ -1.69
HSP42YDR171W MAL33P38157 468 aa4.49□□□□□ -1.69
HSP42YDR171W VPS8P39702 1274 aa4.49□□□□□ -1.69
HSP42YDR171W HIS6P40545 261 aa4.49□□□□□ -1.69
HSP42YDR171W MAD3P47074 515 aa4.49□□□□□ -1.69
HSP42YDR171W PUS4P48567 403 aaKnown RBP4.49□□□□□ -1.69
HSP42YDR171W PIP2P52960 996 aa4.49□□□□□ -1.69
HSP42YDR171W YGL242CP53066 181 aa4.49□□□□□ -1.69
HSP42YDR171W NNF2P53253 936 aa4.49□□□□□ -1.69
HSP42YDR171W ALF1P53904 254 aa4.49□□□□□ -1.69
HSP42YDR171W MOT3P54785 490 aaKnown RBP4.49□□□□□ -1.69
HSP42YDR171W USA1Q03714 838 aa4.49□□□□□ -1.69
HSP42YDR171W ARP7Q12406 477 aa4.49□□□□□ -1.69
HSP42YDR171W FAS2P19097 1887 aaKnown RBP4.49□□□□□ -1.69
HSP42YDR171W ATP4P05626 244 aa4.48□□□□□ -1.69
HSP42YDR171W RPL22AP05749 121 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W RPS24AP0CX31 135 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W RPS24BP0CX32 135 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W SAT4P25333 603 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W YMC1P32331 307 aa4.48□□□□□ -1.69
HSP42YDR171W FLO10P36170 1169 aa4.48□□□□□ -1.69
HSP42YDR171W SPT8P38915 602 aa4.48□□□□□ -1.69
HSP42YDR171W COS12P53053 380 aa4.48□□□□□ -1.69
HSP42YDR171W YGL117WP53133 265 aa4.48□□□□□ -1.69
HSP42YDR171W MLC1P53141 149 aa4.48□□□□□ -1.69
HSP42YDR171W VTC3Q02725 835 aa4.48□□□□□ -1.69
HSP42YDR171W GIS1Q03833 894 aa4.48□□□□□ -1.69
HSP42YDR171W RRB1Q04225 511 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W MLC2Q06580 163 aa4.48□□□□□ -1.69
HSP42YDR171W ATG23Q06671 453 aa4.48□□□□□ -1.69
HSP42YDR171W YDL073WQ07454 984 aa4.48□□□□□ -1.69
HSP42YDR171W RUD3Q12234 484 aaKnown RBP4.48□□□□□ -1.69
HSP42YDR171W ZPS1Q12512 249 aa4.48□□□□□ -1.69
HSP42YDR171W TAD3Q9URQ3 322 aa4.48□□□□□ -1.69
HSP42YDR171W PHO13P19881 312 aa4.47□□□□□ -1.69
HSP42YDR171W RNR3P21672 869 aaKnown RBP4.47□□□□□ -1.69
HSP42YDR171W RPS7AP26786 190 aaKnown RBP4.47□□□□□ -1.69
HSP42YDR171W PTP2P29461 750 aa4.47□□□□□ -1.69
HSP42YDR171W UGP1P32861 499 aaKnown RBP4.47□□□□□ -1.69
HSP42YDR171W LOT5P34234 306 aa4.47□□□□□ -1.69
HSP42YDR171W CCL1P37366 393 aa4.47□□□□□ -1.69
HSP42YDR171W PCH2P38126 564 aa4.47□□□□□ -1.69
HSP42YDR171W BUD16P39988 312 aa4.47□□□□□ -1.69
HSP42YDR171W VFA1P40080 203 aa4.47□□□□□ -1.69
HSP42YDR171W QRI7P43122 407 aa4.47□□□□□ -1.69
HSP42YDR171W SAP4P53036 818 aa4.47□□□□□ -1.69
HSP42YDR171W COQ6P53318 479 aa4.47□□□□□ -1.69
HSP42YDR171W TEP1P53916 434 aa4.47□□□□□ -1.69
HSP42YDR171W TRS31Q03337 283 aa4.47□□□□□ -1.69
HSP42YDR171W TRI1Q05024 226 aa4.47□□□□□ -1.69
HSP42YDR171W EIS1Q05050 843 aaKnown RBP4.47□□□□□ -1.69
HSP42YDR171W ENT2Q05785 613 aa4.47□□□□□ -1.69
HSP42YDR171W ARO10Q06408 635 aa4.47□□□□□ -1.69
HSP42YDR171W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
HSP42YDR171W APL4Q12028 832 aa4.47□□□□□ -1.69
HSP42YDR171W TGS1Q12052 315 aa4.47□□□□□ -1.69
HSP42YDR171W ULA1Q12059 462 aa4.47□□□□□ -1.69
HSP42YDR171W UTP10P42945 1769 aaKnown RBP4.47□□□□□ -1.69
HSP42YDR171W TOP1P04786 769 aa4.46□□□□□ -1.7
HSP42YDR171W MATALPHA2P0CY08 210 aa4.46□□□□□ -1.7
HSP42YDR171W HMLALPHA2P0CY09 210 aa4.46□□□□□ -1.7
HSP42YDR171W YPK1P12688 680 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W PGI1P12709 554 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W SEC14P24280 304 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W RAD51P25454 400 aa4.46□□□□□ -1.7
HSP42YDR171W CDC15P27636 974 aa4.46□□□□□ -1.7
HSP42YDR171W PRE2P30656 287 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W YPT10P38146 199 aa4.46□□□□□ -1.7
HSP42YDR171W RRP8P38961 392 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W NOC2P39744 710 aaKnown RBP4.46□□□□□ -1.7
HSP42YDR171W PAC2P39937 518 aa4.46□□□□□ -1.7
HSP42YDR171W POL31P46957 487 aa4.46□□□□□ -1.7
HSP42YDR171W CAF130P53280 1122 aaPredicted RBP4.46□□□□□ -1.7
HSP42YDR171W CPR8P53728 308 aa4.46□□□□□ -1.7
HSP42YDR171W FMP30Q02883 468 aa4.46□□□□□ -1.7
HSP42YDR171W ARG7Q04728 441 aa4.46□□□□□ -1.7
HSP42YDR171W VPS38Q05919 439 aa4.46□□□□□ -1.7
HSP42YDR171W STE23Q06010 1027 aa4.46□□□□□ -1.7
HSP42YDR171W ADE5,7P07244 802 aaKnown RBP4.45□□□□□ -1.7
HSP42YDR171W MSS18P08593 268 aa4.45□□□□□ -1.7
HSP42YDR171W TUB1P09733 447 aaKnown RBP4.45□□□□□ -1.7
HSP42YDR171W MRPS28P21771 286 aa4.45□□□□□ -1.7
HSP42YDR171W AAD3P25612 363 aa4.45□□□□□ -1.7
HSP42YDR171W PXL1P36166 706 aa4.45□□□□□ -1.7
HSP42YDR171W YSW1P38280 609 aa4.45□□□□□ -1.7
HSP42YDR171W YLF2P38746 405 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms