RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	PTC6	P25646	442 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	MRF1	P30775	413 aa	Predicted RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	PPQ1	P32945	549 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	NIC96	P34077	839 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	YJL206C	P39529	758 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	YCK3	P39962	524 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	GTT3	P39996	337 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	YER137C	P40083	148 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	PHB1	P40961	287 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	IML2	P47031	731 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	SSN8	P47821	323 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	CLA4	P48562	842 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	PRM6	Q04705	352 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	MRX10	Q05648	414 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	RSB1	Q08417	382 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	APC9	Q12107	265 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	NSI1	Q12457	570 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	MET17	P06106	444 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	PRP22	P24384	1145 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	PCA1	P38360	1216 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YHI9	P38765	294 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	PMC1	P38929	1173 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	YJL070C	P40361	888 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	RRN7	P40992	514 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	BRE2	P43132	505 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YFL040W	P43562	540 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YJR098C	P47139	656 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	COS5	P47187	383 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	MPS2	P53159	387 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	NSG2	P53898	299 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	BUL2	Q03758	920 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	MDM36	Q06820	579 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	THI21	Q08975	551 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	TY3A-G	Q12173	290 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	TY3A-I	Q99219	290 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	MOT1	P32333	1867 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	SPE1	P08432	466 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	EST1	P17214	699 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	DAP2	P18962	818 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	PHO84	P25297	587 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	UGA4	P32837	571 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	TAF14	P35189	244 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	ECM13	P38195	257 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	RFS1	P38234	210 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	PHO89	P38361	574 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	MNN9	P39107	395 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	JLP2	P40206	208 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	HOC1	P47124	396 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	EFM3	P47163	339 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	RCF2	P53721	224 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	ORC4	P54791	529 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YPL034W	Q03083	165 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	RQC1	Q05468	723 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	YPR109W	Q06104	294 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	DCP1	Q12517	231 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	COB	P00163	385 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	ATP6	P00854	259 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	BI4	P03879	638 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	COX4	P04037	155 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	CDC31	P06704	161 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	YDJ1	P25491	409 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	PEX6	P33760	1030 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	ATP3	P38077	311 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	TOS1	P38288	455 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	TDP1	P38319	544 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YBR225W	P38321	900 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	SLX1	P38324	304 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	EGD2	P38879	174 aa	Known RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	RGD2	P43556	714 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	PEX8	P53248	589 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	FPK1	P53739	893 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YMR209C	Q03648	457 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	RRP17	Q04031	235 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	MLC2	Q06580	163 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YPL191C	Q08930	360 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	YOR289W	Q12012	251 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA1	YDL185W	BI3	Q9ZZW7	517 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	UBR1	P19812	1950 aa		4.04	□□□□□ -1.76
VMA1	YDL185W	KGD1	P20967	1014 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	HXT2	P23585	541 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	SSE2	P32590	693 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	LRG1	P35688	1017 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	YKL063C	P35725	167 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	RIM4	P38741	713 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	YHR045W	P38775	560 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	DDI1	P40087	428 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	THI12	P42883	340 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	THI5	P43534	340 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VMA1	YDL185W	PHO86	P46956	311 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	TAH11	P47112	604 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	THI11	P47183	340 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	MRPL50	P53724	139 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	IMP4	P53941	290 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	THI13	Q07748	340 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	SAM4	Q08985	325 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	HUA2	Q12134	243 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	RTR2	Q12378	196 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	ATG31	Q12421	196 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms