RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YDR109C	Q04585	715 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	MFB1	Q04922	465 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	TCO89	Q08921	799 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	BAG7	Q12128	409 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	YBR085C-A	O43137	85 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	COX1	P00401	534 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	SUI3	P09064	285 aa	Known RBP	5.88	□□□□□ -1.47
RPN5	YDL147W	OLE1	P21147	510 aa	Known RBP	5.88	□□□□□ -1.47
RPN5	YDL147W	AMD2	P22580	549 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	FMP10	P40098	244 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	DCP2	P53550	970 aa	Known RBP	5.88	□□□□□ -1.47
RPN5	YDL147W	YML119W	Q03208	357 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	WAR1	Q03631	944 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	YML053C	Q04978	212 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	RCN2	Q12044	265 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	PRS5	Q12265	496 aa	Known RBP	5.88	□□□□□ -1.47
RPN5	YDL147W	TAF3	Q12297	353 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	SCM3	Q12334	223 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	YOR019W	Q99248	730 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	AI5_ALPHA	Q9ZZX1	630 aa		5.88	□□□□□ -1.47
RPN5	YDL147W	GEX2	P36173	615 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	YMC2	P38087	329 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	FLC2	P39719	783 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	CIR1	P42940	261 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	NPA3	P47122	385 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	CPR8	P53728	308 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	YNL092W	P53934	400 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	TIM10	P87108	93 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	SYF1	Q04048	859 aa	Predicted RBP	5.87	□□□□□ -1.47
RPN5	YDL147W	SKG3	Q06315	1026 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	CRN1	Q06440	651 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	CTI6	Q08923	506 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
RPN5	YDL147W	YPL191C	Q08930	360 aa		5.87	□□□□□ -1.47
RPN5	YDL147W	TPK2	P06245	380 aa		5.86	□□□□□ -1.47
RPN5	YDL147W	LAC1	P28496	418 aa		5.86	□□□□□ -1.47
RPN5	YDL147W	HES1	P35843	434 aa		5.86	□□□□□ -1.47
RPN5	YDL147W	CCT7	P42943	550 aa	Known RBP	5.86	□□□□□ -1.47
RPN5	YDL147W	PIL1	P53252	339 aa	Known RBP	5.86	□□□□□ -1.47
RPN5	YDL147W	PUS9	Q12069	462 aa		5.86	□□□□□ -1.47
RPN5	YDL147W	NMD4	Q12129	218 aa		5.86	□□□□□ -1.47
RPN5	YDL147W	AHA1	Q12449	350 aa	Known RBP	5.86	□□□□□ -1.47
RPN5	YDL147W	CKA1	P15790	372 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	GDA1	P32621	518 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	VBA2	P38358	474 aa	Known RBP	5.85	□□□□□ -1.47
RPN5	YDL147W	UTP9	P38882	575 aa	Known RBP	5.85	□□□□□ -1.47
RPN5	YDL147W	NPR2	P39923	615 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	OPT1	P40897	799 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	RMD8	P43620	662 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	MSY1	P48527	492 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	ARE2	P53629	642 aa	Known RBP	5.85	□□□□□ -1.47
RPN5	YDL147W	INN1	P53901	409 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	TAF11	Q04226	346 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	PLM2	Q04383	521 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	SWA2	Q06677	668 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	RIX7	Q07844	837 aa	Known RBP	5.85	□□□□□ -1.47
RPN5	YDL147W	LCB4	Q12246	624 aa		5.85	□□□□□ -1.47
RPN5	YDL147W	MAL33	P38157	468 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	ERC1	P38767	581 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	MIT1	P40002	666 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	JHD1	P40034	492 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	SDS3	P40505	327 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	DSD1	P53095	428 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	YGL117W	P53133	265 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	YNL058C	P53947	316 aa		5.84	□□□□□ -1.47
RPN5	YDL147W	RRG1	Q12167	365 aa	Predicted RBP	5.84	□□□□□ -1.47
RPN5	YDL147W	ARG3	P05150	338 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	STE12	P13574	688 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	OCA4	P25366	362 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	AUR1	P36107	401 aa	Predicted RBP	5.83	□□□□□ -1.48
RPN5	YDL147W	AGP2	P38090	596 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	SAP1	P39955	897 aa	Known RBP	5.83	□□□□□ -1.48
RPN5	YDL147W	MRX6	P48564	524 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	VPS75	P53853	264 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	YAT1	P80235	687 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	RAD33	Q04231	177 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	SFI1	Q12369	946 aa		5.83	□□□□□ -1.48
RPN5	YDL147W	YMR084W	A2P2R3	262 aa		5.82	□□□□□ -1.48
RPN5	YDL147W	ILV2	P07342	687 aa	Known RBP	5.82	□□□□□ -1.48
RPN5	YDL147W	RED1	P14291	827 aa		5.82	□□□□□ -1.48
RPN5	YDL147W	NFU1	P32860	256 aa		5.82	□□□□□ -1.48
RPN5	YDL147W	MRX1	P40050	688 aa		5.82	□□□□□ -1.48
RPN5	YDL147W	ASN1	P49089	572 aa	Known RBP	5.82	□□□□□ -1.48
RPN5	YDL147W	PSR1	Q07800	427 aa		5.82	□□□□□ -1.48
RPN5	YDL147W	CET1	O13297	549 aa	Predicted RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	POL4	P25615	582 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	NPL6	P32832	435 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	SOF1	P33750	489 aa	Known RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	KES1	P35844	434 aa	Known RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	LHS1	P36016	881 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	MUP3	P38734	546 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	ASG1	P40467	964 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	SEC24	P40482	926 aa	Known RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	GLO1	P50107	326 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	YNR061C	P53747	219 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	ADE16	P54113	591 aa	Known RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	CTF4	Q01454	927 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	YPL071C	Q02864	156 aa		5.81	□□□□□ -1.48
RPN5	YDL147W	UTP21	Q06078	939 aa	Predicted RBP	5.81	□□□□□ -1.48
RPN5	YDL147W	RPL7A	P05737	244 aa	Known RBP	5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms