RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	YJR061W	P40355	935 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	SET2	P46995	733 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	YTP1	P53584	459 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	COP1	P53622	1201 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	SWC7	Q06707	132 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	SYT1	Q06836	1226 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	10.38	□□□□□ -0.75	not detected
YCL074W	YCL074W	STE6	P12866	1290 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	RPL5	P26321	297 aa	Known RBP	10.37	□□□□□ -0.75
YCL074W	YCL074W	AEP1	P32493	518 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	MRP21	P38175	177 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	ARN1	P38731	627 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	TVP23	P38962	199 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	YHB1	P39676	399 aa	Known RBP	10.37	□□□□□ -0.75
YCL074W	YCL074W	PDS1	P40316	373 aa	Predicted RBP	10.37	□□□□□ -0.75
YCL074W	YCL074W	AIF1	P52923	378 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	TAN1	P53072	289 aa	Predicted RBP	10.37	□□□□□ -0.75
YCL074W	YCL074W	SLM2	P53955	656 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	CDC14	Q00684	551 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	SPC2	Q04969	178 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	FAR10	Q06001	478 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	MCH5	Q08777	521 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	PKH2	Q12236	1081 aa	Known RBP	10.37	□□□□□ -0.75
YCL074W	YCL074W	ATG34	Q12292	412 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	YOR131C	Q12486	218 aa		10.37	□□□□□ -0.75
YCL074W	YCL074W	VPH2	P32341	215 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	MNN1	P39106	762 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	FHL1	P39521	936 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	ARH1	P48360	493 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	YNL010W	P53981	241 aa	Known RBP	10.36	□□□□□ -0.75
YCL074W	YCL074W	REX2	P54964	269 aa	Known RBP	10.36	□□□□□ -0.75
YCL074W	YCL074W	MTD1	Q02046	320 aa	Known RBP	10.36	□□□□□ -0.75
YCL074W	YCL074W	TRS31	Q03337	283 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	INP2	Q03824	705 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	HDA3	Q06623	655 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	MDM20	Q12387	796 aa	Known RBP	10.36	□□□□□ -0.75
YCL074W	YCL074W	AFI1	Q99222	893 aa		10.36	□□□□□ -0.75
YCL074W	YCL074W	STE2	D6VTK4	431 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	COX5A	P00424	153 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	DPH5	P32469	300 aa	Predicted RBP	10.35	□□□□□ -0.75
YCL074W	YCL074W	GGA2	P38817	585 aa	Known RBP	10.35	□□□□□ -0.75
YCL074W	YCL074W	BEM4	P39011	633 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	ELO3	P40319	345 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	PRM2	P40534	656 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	YGL108C	P53139	140 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	PEX8	P53248	589 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	GND2	P53319	492 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	YNL115C	P53925	644 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	LSM3	P57743	89 aa	Known RBP	10.35	□□□□□ -0.75
YCL074W	YCL074W	YDR109C	Q04585	715 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	DYN3	Q04949	312 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	ATG17	Q06410	417 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	ASA1	Q06822	443 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	SVS1	Q12254	260 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	TIF6	Q12522	245 aa	Known RBP	10.35	□□□□□ -0.75
YCL074W	YCL074W	NHA1	Q99271	985 aa		10.35	□□□□□ -0.75
YCL074W	YCL074W	MIS1	P09440	975 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	KGD2	P19262	463 aa	Predicted RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	TRX2	P22803	104 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	YCR090C	P25654	182 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	ATP7	P30902	174 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	CCR4	P31384	837 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	SPT16	P32558	1035 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	DSS4	P32601	143 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	CDC27	P38042	758 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	PDX3	P38075	228 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	KAP104	P38217	918 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	SEO1	P39709	593 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	SCS2	P40075	244 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	PSF2	P40359	213 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	HPM1	P40481	377 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	YFL040W	P43562	540 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	DLD2	P46681	530 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	SNG1	P46950	547 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	RTT101	P47050	842 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	MRX6	P48564	524 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	NOP19	P53317	196 aa	Predicted RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	ARC35	P53731	342 aa	Known RBP	10.34	□□□□□ -0.75
YCL074W	YCL074W	RSC4	Q02206	625 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	GLO2	Q05584	274 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	YOL019W	Q08157	551 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	PGC1	Q08959	321 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	MDY2	Q12285	212 aa		10.34	□□□□□ -0.75
YCL074W	YCL074W	TUB1	P09733	447 aa	Known RBP	10.33	□□□□□ -0.76
YCL074W	YCL074W	TOM20	P35180	183 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	XDJ1	P39102	459 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	EFM6	P53970	246 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	PET117	Q02771	107 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	ESA1	Q08649	445 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	NSL1	Q12143	216 aa		10.33	□□□□□ -0.76
YCL074W	YCL074W	CMR1	Q12510	522 aa	Known RBP	10.33	□□□□□ -0.76
YCL074W	YCL074W	GLN4	P13188	809 aa	Known RBP	10.32	□□□□□ -0.76
YCL074W	YCL074W	RPB4	P20433	221 aa	Predicted RBP	10.32	□□□□□ -0.76
YCL074W	YCL074W	CSM1	P25651	190 aa		10.32	□□□□□ -0.76
YCL074W	YCL074W	BEM1	P29366	551 aa		10.32	□□□□□ -0.76
YCL074W	YCL074W	PTH2	P34222	208 aa		10.32	□□□□□ -0.76
YCL074W	YCL074W	MAK5	P38112	773 aa	Predicted RBP	10.32	□□□□□ -0.76
YCL074W	YCL074W	YBR284W	P38150	797 aa		10.32	□□□□□ -0.76
YCL074W	YCL074W	SLM4	P38247	162 aa		10.32	□□□□□ -0.76
YCL074W	YCL074W	YHL041W	P38730	149 aa		10.32	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms