RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	DIG1	Q03063	452 aa	Known RBP	4.12	□□□□□ -1.75
APM3	YBR288C	IWR1	Q07532	353 aa	Predicted RBP	4.12	□□□□□ -1.75
APM3	YBR288C	NRT1	Q08485	598 aa		4.12	□□□□□ -1.75
APM3	YBR288C	PET122	P10355	254 aa		4.11	□□□□□ -1.75
APM3	YBR288C	APM3	P38153	483 aa		4.11	□□□□□ -1.75
APM3	YBR288C	CCT4	P39078	528 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	BUD16	P39988	312 aa		4.11	□□□□□ -1.75
APM3	YBR288C	UBP8	P50102	471 aa		4.11	□□□□□ -1.75
APM3	YBR288C	PEX8	P53248	589 aa		4.11	□□□□□ -1.75
APM3	YBR288C	IZH1	Q03419	316 aa		4.11	□□□□□ -1.75
APM3	YBR288C	GRS2	Q06817	618 aa		4.11	□□□□□ -1.75
APM3	YBR288C	YER145C-A	A0A023PYF4	145 aa		4.11	□□□□□ -1.75
APM3	YBR288C	SUI3	P09064	285 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	MCM3	P24279	971 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	ARP2	P32381	391 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	SKP2	P42843	763 aa		4.11	□□□□□ -1.75
APM3	YBR288C	ADE16	P54113	591 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	ECM16	Q04217	1267 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	TMA7	Q3E764	64 aa	Known RBP	4.11	□□□□□ -1.75
APM3	YBR288C	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
APM3	YBR288C	RFA2	P26754	273 aa	Known RBP	4.1	□□□□□ -1.75
APM3	YBR288C	QRI7	P43122	407 aa		4.1	□□□□□ -1.75
APM3	YBR288C	MTG1	Q03151	367 aa	Predicted RBP	4.1	□□□□□ -1.75
APM3	YBR288C	HIM1	Q06674	414 aa		4.1	□□□□□ -1.75
APM3	YBR288C	POS5	Q06892	414 aa		4.1	□□□□□ -1.75
APM3	YBR288C	GCD7	P32502	381 aa	Predicted RBP	4.09	□□□□□ -1.75
APM3	YBR288C	MNN2	P38069	597 aa		4.09	□□□□□ -1.75
APM3	YBR288C	PCL6	P40038	420 aa		4.09	□□□□□ -1.75
APM3	YBR288C	CAC2	Q04199	468 aa		4.09	□□□□□ -1.75
APM3	YBR288C	SWF1	Q04629	336 aa		4.09	□□□□□ -1.75
APM3	YBR288C	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.75
APM3	YBR288C	STP3	Q05937	343 aa		4.09	□□□□□ -1.75
APM3	YBR288C	BAG7	Q12128	409 aa		4.09	□□□□□ -1.75
APM3	YBR288C	YOR111W	Q99210	232 aa		4.09	□□□□□ -1.75
APM3	YBR288C	PIF1	P07271	859 aa		4.08	□□□□□ -1.76
APM3	YBR288C	MRP2	P10663	115 aa	Predicted RBP	4.08	□□□□□ -1.76
APM3	YBR288C	PCT1	P13259	424 aa		4.08	□□□□□ -1.76
APM3	YBR288C	YKL133C	P36066	463 aa		4.08	□□□□□ -1.76
APM3	YBR288C	DJP1	P40564	432 aa		4.08	□□□□□ -1.76
APM3	YBR288C	SAD1	P43589	448 aa		4.08	□□□□□ -1.76
APM3	YBR288C	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
APM3	YBR288C	BRE1	Q07457	700 aa	Known RBP	4.08	□□□□□ -1.76
APM3	YBR288C	MIS1	P09440	975 aa	Known RBP	4.07	□□□□□ -1.76
APM3	YBR288C	CPR6	P53691	371 aa	Known RBP	4.07	□□□□□ -1.76
APM3	YBR288C	MET14	Q02196	202 aa		4.07	□□□□□ -1.76
APM3	YBR288C	YML003W	P0CF16	290 aa		4.06	□□□□□ -1.76
APM3	YBR288C	BIK1	P11709	440 aa		4.06	□□□□□ -1.76
APM3	YBR288C	YSP3	P25036	478 aa		4.06	□□□□□ -1.76
APM3	YBR288C	SPC72	P39723	622 aa		4.06	□□□□□ -1.76
APM3	YBR288C	YND1	P40009	630 aa		4.06	□□□□□ -1.76
APM3	YBR288C	PHM8	P40025	321 aa		4.06	□□□□□ -1.76
APM3	YBR288C	ASG1	P40467	964 aa		4.06	□□□□□ -1.76
APM3	YBR288C	HIS6	P40545	261 aa		4.06	□□□□□ -1.76
APM3	YBR288C	ZAP1	P47043	880 aa		4.06	□□□□□ -1.76
APM3	YBR288C	IMA1	P53051	589 aa		4.06	□□□□□ -1.76
APM3	YBR288C	YGL260W	P53056	76 aa		4.06	□□□□□ -1.76
APM3	YBR288C	ARP9	Q05123	467 aa		4.06	□□□□□ -1.76
APM3	YBR288C	GAL1	P04385	528 aa		4.05	□□□□□ -1.76
APM3	YBR288C	RTT107	P38850	1070 aa		4.05	□□□□□ -1.76
APM3	YBR288C	VRG4	P40107	337 aa		4.05	□□□□□ -1.76
APM3	YBR288C	ESBP6	P53918	673 aa		4.05	□□□□□ -1.76
APM3	YBR288C	ECI1	Q05871	280 aa		4.05	□□□□□ -1.76
APM3	YBR288C	YLR455W	Q06188	304 aa		4.05	□□□□□ -1.76
APM3	YBR288C	MLC2	Q06580	163 aa		4.05	□□□□□ -1.76
APM3	YBR288C	ATG23	Q06671	453 aa		4.05	□□□□□ -1.76
APM3	YBR288C	YLR049C	Q12110	428 aa		4.05	□□□□□ -1.76
APM3	YBR288C	MSS18	P08593	268 aa		4.05	□□□□□ -1.76
APM3	YBR288C	LRE1	P25579	583 aa	Known RBP	4.05	□□□□□ -1.76
APM3	YBR288C	MSH1	P25846	959 aa		4.05	□□□□□ -1.76
APM3	YBR288C	TAN1	P53072	289 aa	Predicted RBP	4.05	□□□□□ -1.76
APM3	YBR288C	FMP42	Q04991	504 aa		4.05	□□□□□ -1.76
APM3	YBR288C	GPN2	Q08726	347 aa	Predicted RBP	4.05	□□□□□ -1.76
APM3	YBR288C	CBP1	P07252	654 aa		4.04	□□□□□ -1.76
APM3	YBR288C	ADE17	P38009	592 aa	Known RBP	4.04	□□□□□ -1.76
APM3	YBR288C	UBP13	P38187	747 aa		4.04	□□□□□ -1.76
APM3	YBR288C	YBR138C	P38277	524 aa		4.04	□□□□□ -1.76
APM3	YBR288C	FSH1	P38777	243 aa	Known RBP	4.04	□□□□□ -1.76
APM3	YBR288C	HOS2	P53096	452 aa	Predicted RBP	4.04	□□□□□ -1.76
APM3	YBR288C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
APM3	YBR288C	YLR281C	Q05863	155 aa		4.04	□□□□□ -1.76
APM3	YBR288C	YTH1	Q06102	208 aa	Predicted RBP	4.04	□□□□□ -1.76
APM3	YBR288C	PPZ1	P26570	692 aa		4.03	□□□□□ -1.76
APM3	YBR288C	RKM3	P38222	552 aa		4.03	□□□□□ -1.76
APM3	YBR288C	ERR3	P42222	437 aa		4.03	□□□□□ -1.76
APM3	YBR288C	YMR317W	Q04893	1140 aa		4.03	□□□□□ -1.76
APM3	YBR288C	SWA2	Q06677	668 aa		4.03	□□□□□ -1.76
APM3	YBR288C	APL5	Q08951	932 aa	Known RBP	4.03	□□□□□ -1.76
APM3	YBR288C	VPS27	P40343	622 aa	Known RBP	4.02	□□□□□ -1.77
APM3	YBR288C	PSP1	P50896	841 aa	Known RBP	4.02	□□□□□ -1.77
APM3	YBR288C	ASI1	P54074	624 aa		4.02	□□□□□ -1.77
APM3	YBR288C	SWT1	Q12104	458 aa		4.02	□□□□□ -1.77
APM3	YBR288C	PHO2	P07269	559 aa		4.01	□□□□□ -1.77
APM3	YBR288C	CLB4	P24871	460 aa		4.01	□□□□□ -1.77
APM3	YBR288C	PTP2	P29461	750 aa		4.01	□□□□□ -1.77
APM3	YBR288C	EXO84	P38261	753 aa		4.01	□□□□□ -1.77
APM3	YBR288C	LEU5	P38702	357 aa		4.01	□□□□□ -1.77
APM3	YBR288C	PUG1	P40100	303 aa		4.01	□□□□□ -1.77
APM3	YBR288C	DCP2	P53550	970 aa	Known RBP	4.01	□□□□□ -1.77
APM3	YBR288C	TRS130	Q03660	1102 aa		4.01	□□□□□ -1.77
APM3	YBR288C	YMR254C	Q04838	102 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms