RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	TES1	P41903	349 aa	Known RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	RGD2	P43556	714 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	BUD13	P46947	266 aa	Predicted RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	PMT3	P47190	753 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	STR3	P53101	465 aa	Known RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	HST3	P53687	447 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	YMR160W	Q03823	816 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	SSL1	Q04673	461 aa	Predicted RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	CIA1	Q05583	330 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	MCP2	Q06567	569 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	AAD15	Q08361	143 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SAF1	YBR280C	RRP6	Q12149	733 aa	Known RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	GLE1	Q12315	538 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	IPP1	P00817	287 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	TUB3	P09734	445 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	RPL43A	P0CX25	92 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	RPL43B	P0CX26	92 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	SEC23	P15303	768 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	PDC5	P16467	563 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	SFL1	P20134	766 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	AEP1	P32493	518 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	SPS19	P32573	292 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	GMH1	P36125	273 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	CYC2	P38909	366 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	FAU1	P40099	211 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	RPL34B	P40525	121 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	SPG5	P42933	373 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	TY4A-J	P47023	414 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	COG1	P53079	417 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	NOG2	P53742	486 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	FRE4	P53746	719 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	RSC4	Q02206	625 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	HAP5	Q02516	242 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	ARX1	Q03862	593 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	SIZ1	Q04195	904 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	GSF2	Q04697	403 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	GUP2	Q08929	609 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	TGL5	Q12043	749 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	UBR1	P19812	1950 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	PDR1	P12383	1068 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	APA1	P16550	321 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	ATE1	P16639	503 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	EMC1	P25574	760 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	DBF4	P32325	704 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	TAF14	P35189	244 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	PHO11	P35842	467 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	VPS24	P36095	224 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	PHO12	P38693	467 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	DED81	P38707	554 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	PCL5	P38794	229 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	TIM17	P39515	158 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	SSU1	P41930	458 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	VNX1	P42839	908 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	SAP4	P53036	818 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	CDC14	Q00684	551 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	SYH1	Q02875	849 aa	Known RBP	4.56	□□□□□ -1.68
SAF1	YBR280C	FRT1	Q99332	602 aa		4.56	□□□□□ -1.68
SAF1	YBR280C	CPA1	P07258	411 aa	Known RBP	4.55	□□□□□ -1.68
SAF1	YBR280C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SAF1	YBR280C	CLN1	P20437	546 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	PLC1	P32383	869 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	PET309	P32522	965 aa	Predicted RBP	4.55	□□□□□ -1.68
SAF1	YBR280C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SAF1	YBR280C	CDC13	P32797	924 aa	Known RBP	4.55	□□□□□ -1.68
SAF1	YBR280C	MPE1	P35728	441 aa	Known RBP	4.55	□□□□□ -1.68
SAF1	YBR280C	RTT107	P38850	1070 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	FLC2	P39719	783 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	TRS23	Q03784	219 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	ATG16	Q03818	150 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	THI7	Q05998	598 aa		4.55	□□□□□ -1.68
SAF1	YBR280C	SMF3	Q12078	473 aa	Predicted RBP	4.55	□□□□□ -1.68
SAF1	YBR280C	SPO12	P17123	173 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	MSB1	P21339	1137 aa	Known RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	PHO84	P25297	587 aa	Known RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	LYP1	P32487	611 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	EMC3	P36039	253 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	PMC1	P38929	1173 aa	Predicted RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	YMR124W	P39523	943 aa	Known RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	GND2	P53319	492 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	SIW14	P53965	281 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	SSL2	Q00578	843 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	ELP4	Q02884	456 aa	Known RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	YDR132C	Q03900	495 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	RCO1	Q04779	684 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	ARP9	Q05123	467 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	YDR278C	Q05612	105 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	PFA4	Q12006	378 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SAF1	YBR280C	SLY1	P22213	666 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	YSP3	P25036	478 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	YCR006C	P25350	157 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	LDB16	P25587	256 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	MVD1	P32377	396 aa	Known RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	HOG1	P32485	435 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	RPN12	P32496	274 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	RAD5	P32849	1169 aa	Predicted RBP	4.54	□□□□□ -1.68
SAF1	YBR280C	SQT1	P35184	431 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	HIS2	P38635	335 aa		4.54	□□□□□ -1.68
SAF1	YBR280C	DBP8	P38719	431 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms