RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W PER1P25625 357 aa1.68□□□□□ -2.14
VPS15YBR097W PYC2P32327 1180 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W HXT4P32467 576 aa1.68□□□□□ -2.14
VPS15YBR097W NDC1P32500 655 aa1.68□□□□□ -2.14
VPS15YBR097W YPT7P32939 208 aa1.68□□□□□ -2.14
VPS15YBR097W SET3P36124 751 aa1.68□□□□□ -2.14
VPS15YBR097W AGP2P38090 596 aa1.68□□□□□ -2.14
VPS15YBR097W SEA4P38164 1038 aa1.68□□□□□ -2.14
VPS15YBR097W UBP13P38187 747 aa1.68□□□□□ -2.14
VPS15YBR097W PPE1P38796 400 aa1.68□□□□□ -2.14
VPS15YBR097W ATG7P38862 630 aa1.68□□□□□ -2.14
VPS15YBR097W PCF11P39081 626 aaPredicted RBP1.68□□□□□ -2.14
VPS15YBR097W CAT8P39113 1433 aa1.68□□□□□ -2.14
VPS15YBR097W SMB1P40018 196 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W SAD1P43589 448 aa1.68□□□□□ -2.14
VPS15YBR097W RFX1P48743 811 aa1.68□□□□□ -2.14
VPS15YBR097W PHO23P50947 330 aa1.68□□□□□ -2.14
VPS15YBR097W YNL115CP53925 644 aa1.68□□□□□ -2.14
VPS15YBR097W EFM6P53970 246 aa1.68□□□□□ -2.14
VPS15YBR097W MFM1Q02783 413 aa1.68□□□□□ -2.14
VPS15YBR097W TFB2Q02939 513 aa1.68□□□□□ -2.14
VPS15YBR097W YDR248CQ03786 193 aa1.68□□□□□ -2.14
VPS15YBR097W YDR131CQ03899 556 aa1.68□□□□□ -2.14
VPS15YBR097W TAP42Q04372 366 aa1.68□□□□□ -2.14
VPS15YBR097W RRN11Q04712 507 aa1.68□□□□□ -2.14
VPS15YBR097W PSK2Q08217 1101 aa1.68□□□□□ -2.14
VPS15YBR097W DNL4Q08387 944 aaPredicted RBP1.68□□□□□ -2.14
VPS15YBR097W ULA1Q12059 462 aa1.68□□□□□ -2.14
VPS15YBR097W YCT1Q12235 531 aa1.68□□□□□ -2.14
VPS15YBR097W AHC1Q12433 566 aa1.68□□□□□ -2.14
VPS15YBR097W AI5_BETAQ9ZZX0 354 aa1.68□□□□□ -2.14
VPS15YBR097W PDR5P33302 1511 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W TIF1P10081 395 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W ANB1P19211 157 aa1.68□□□□□ -2.14
VPS15YBR097W HNM1P19807 563 aa1.68□□□□□ -2.14
VPS15YBR097W RPL24BP24000 155 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W CDC10P25342 322 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W RHB1P25378 209 aa1.68□□□□□ -2.14
VPS15YBR097W PAH1P32567 862 aa1.68□□□□□ -2.14
VPS15YBR097W SNU114P36048 1008 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W PGM2P37012 569 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W SIF2P38262 535 aa1.68□□□□□ -2.14
VPS15YBR097W MRX1P40050 688 aa1.68□□□□□ -2.14
VPS15YBR097W PSF2P40359 213 aa1.68□□□□□ -2.14
VPS15YBR097W KTR7P40504 517 aa1.68□□□□□ -2.14
VPS15YBR097W SGN1P40561 250 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
VPS15YBR097W LYS14P40971 790 aa1.68□□□□□ -2.14
VPS15YBR097W SNZ3P43545 298 aa1.68□□□□□ -2.14
VPS15YBR097W MIC19P43594 170 aa1.68□□□□□ -2.14
VPS15YBR097W RPS10BP46784 105 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W LSM8P47093 109 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W POL32P47110 350 aa1.68□□□□□ -2.14
VPS15YBR097W KXD1P53158 218 aa1.68□□□□□ -2.14
VPS15YBR097W PUS6P53294 404 aa1.68□□□□□ -2.14
VPS15YBR097W LSC1P53598 329 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W ARC35P53731 342 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W NOG2P53742 486 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W SNZ2P53824 298 aa1.68□□□□□ -2.14
VPS15YBR097W YNL193WP53870 558 aa1.68□□□□□ -2.14
VPS15YBR097W ERG5P54781 538 aa1.68□□□□□ -2.14
VPS15YBR097W ADE12P80210 433 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W MRP51Q02950 344 aa1.68□□□□□ -2.14
VPS15YBR097W TRM82Q03774 444 aa1.68□□□□□ -2.14
VPS15YBR097W RUB1Q03919 77 aa1.68□□□□□ -2.14
VPS15YBR097W DLT1Q04216 342 aa1.68□□□□□ -2.14
VPS15YBR097W YMR087WQ04299 284 aa1.68□□□□□ -2.14
VPS15YBR097W ECM22Q05958 814 aaPredicted RBP1.68□□□□□ -2.14
VPS15YBR097W SFH1Q06168 426 aa1.68□□□□□ -2.14
VPS15YBR097W YLR326WQ06170 240 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W CNL1Q06333 122 aa1.68□□□□□ -2.14
VPS15YBR097W YDL124WQ07551 312 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W RSC58Q07979 502 aa1.68□□□□□ -2.14
VPS15YBR097W SSP2Q08646 371 aa1.68□□□□□ -2.14
VPS15YBR097W BUD7Q08754 746 aa1.68□□□□□ -2.14
VPS15YBR097W PRP46Q12417 451 aaPredicted RBP1.68□□□□□ -2.14
VPS15YBR097W TRP3P00937 484 aa1.68□□□□□ -2.14
VPS15YBR097W SSA3P09435 649 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W HMG2P12684 1045 aa1.68□□□□□ -2.14
VPS15YBR097W ABF1P14164 731 aa1.68□□□□□ -2.14
VPS15YBR097W RAM2P29703 316 aa1.68□□□□□ -2.14
VPS15YBR097W YME2P32843 850 aa1.68□□□□□ -2.14
VPS15YBR097W TIP20P33891 701 aa1.68□□□□□ -2.14
VPS15YBR097W PTC3P34221 468 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W HES1P35843 434 aa1.68□□□□□ -2.14
VPS15YBR097W RMA1P36001 430 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W KAE1P36132 386 aa1.68□□□□□ -2.14
VPS15YBR097W SRO77P38163 1010 aa1.68□□□□□ -2.14
VPS15YBR097W VID24P38263 362 aa1.68□□□□□ -2.14
VPS15YBR097W YBR242WP38331 238 aa1.68□□□□□ -2.14
VPS15YBR097W SIC1P38634 284 aa1.68□□□□□ -2.14
VPS15YBR097W MSR1P38714 643 aa1.68□□□□□ -2.14
VPS15YBR097W REV7P38927 245 aa1.68□□□□□ -2.14
VPS15YBR097W MSS4P38994 779 aa1.68□□□□□ -2.14
VPS15YBR097W NUP60P39705 539 aa1.68□□□□□ -2.14
VPS15YBR097W UBP5P39944 805 aa1.68□□□□□ -2.14
VPS15YBR097W PAC1P39946 494 aaKnown RBP1.68□□□□□ -2.14
VPS15YBR097W RMD6P39975 231 aa1.68□□□□□ -2.14
VPS15YBR097W ICP55P40051 511 aa1.68□□□□□ -2.14
VPS15YBR097W CEP3P40969 608 aa1.68□□□□□ -2.14
VPS15YBR097W MSS2P40990 351 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms