RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	IRC5	P43610	853 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	IRC8	P47046	822 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	ENP2	P48234	707 aa	Known RBP	3.82	□□□□□ -1.8
YAL004W	YAL004W	GCV2	P49095	1034 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	LYS4	P49367	693 aa	Predicted RBP	3.82	□□□□□ -1.8
YAL004W	YAL004W	YKE2	P52553	114 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	VTC3	Q02725	835 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	TPP1	Q03796	238 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	THI3	Q07471	609 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	ACM1	Q08981	209 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	NBP2	Q12163	236 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	YBR126W-A	Q8TGU7	68 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	TPK1	P06244	397 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YEL076C-A	P0CX16	216 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YLR464W	P0CX17	216 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	CDC24	P11433	854 aa	Predicted RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	HOM2	P13663	365 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
YAL004W	YAL004W	HNM1	P19807	563 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	PWP1	P21304	576 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	CLB1	P24868	471 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YCL002C	P25565	263 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	RDS1	P25611	832 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
YAL004W	YAL004W	DGR2	P32330	852 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	NIP1	P32497	812 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	PPQ1	P32945	549 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	BMH2	P34730	273 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	STB6	P36085	766 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YKR018C	P36114	725 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	PFF1	P38244	976 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YBR138C	P38277	524 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	GND1	P38720	489 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	SPL2	P38839	148 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	VPS45	P38932	577 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YAR028W	P39548	234 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YEL076C	P39971	216 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YIL161W	P40449	235 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	THI6	P41835	540 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YPT11	P48559	417 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YNR068C	P53754	272 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	NOP15	P53927	220 aa	Predicted RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	ERV25	P54837	211 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	LRS4	Q04087	347 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	PHO92	Q06390	306 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	CTI6	Q08923	506 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	RCN2	Q12044	265 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	GET3	Q12154	354 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	MDY2	Q12285	212 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YBR182C-A	Q8TGU6	64 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	URB1	P34241	1764 aa	Known RBP	3.81	□□□□□ -1.8
YAL004W	YAL004W	YIL177C	P40434	1758 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	YJL225C	P40889	1758 aa		3.81	□□□□□ -1.8
YAL004W	YAL004W	SUI3	P09064	285 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	RNA1	P11745	407 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	CDC26	P14724	124 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	FRS2	P15625	503 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	COQ1	P18900	473 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	RFA1	P22336	621 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	GRR1	P24814	1151 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	CLB3	P24870	427 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	GYP6	P32806	458 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	SLA2	P33338	968 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	MYO3	P36006	1272 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	YKL151C	P36059	337 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	YBL029W	P38201	376 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	SIF2	P38262	535 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	MTG2	P38860	518 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	SET5	P38890	526 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	MEF2	P39677	819 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	BUD16	P39988	312 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	YMR147W	P40218	223 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	ATF1	P40353	525 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	TFG2	P41896	400 aa	Predicted RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	ZIM17	P42844	174 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	LAM5	P43560	674 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	AGX1	P43567	385 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	MRX6	P48564	524 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	PSP1	P50896	841 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	ARP5	P53946	755 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	GPD1	Q00055	391 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	RPS15	Q01855	142 aa	Known RBP	3.8	□□□□□ -1.8
YAL004W	YAL004W	YSA1	Q01976	231 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	RRN5	Q02983	363 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	YPR196W	Q06595	470 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	AVO1	Q08236	1176 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	RSB1	Q08417	382 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	CIR2	Q08822	631 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	TGL5	Q12043	749 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	SKS1	Q12505	502 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	Q0142	Q9ZZW4	58 aa		3.8	□□□□□ -1.8
YAL004W	YAL004W	FKS3	Q04952	1785 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	RPS9A	O13516	197 aa	Known RBP	3.79	□□□□□ -1.8
YAL004W	YAL004W	YLR302C	O13544	120 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	YML002W	P0CF17	737 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	PCK1	P10963	549 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	LAT1	P12695	482 aa	Known RBP	3.79	□□□□□ -1.8
YAL004W	YAL004W	APE1	P14904	514 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	OM45	P16547	393 aa		3.79	□□□□□ -1.8
YAL004W	YAL004W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.79	□□□□□ -1.8	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms