RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CCDC178Q5BJE1 867 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 PARD6BQ9BYG5 372 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 CHL1O00533 1208 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 N4BP3O15049 544 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 RXRAP19793 462 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 PAPOLAP51003 745 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 NLRP12P59046 1061 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 DDR1Q08345 913 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 GGA2Q9UJY4 613 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SAR1BQ9Y6B6 198 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 ESRRBO95718 433 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 PHBP35232 272 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 CCDC62Q6P9F0 684 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 RAB3IL1Q8TBN0 382 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 MCUR1Q96AQ8 359 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SCHIP1Q9P0W5 487 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 GCC2Q8IWJ2 1684 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 ZFYVE9O95405 1425 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 ABCC10Q5T3U5 1492 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 EIF3BP55884 814 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 BIRC3Q13489 604 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SESTD1Q86VW0 696 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 NDUFB9Q9Y6M9 179 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 ZBTB22O15209 634 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 ZBTB43O43298 467 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 VIMP08670 466 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 MATR3P43243 847 aaKnown RBP eCLIP9.15□□□□□ -0.946e-7■■■■□ 26.2
NECAP1-227ENST00000640648 NOP14P78316 857 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 FANCCQ00597 558 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 MAGEC3Q8TD91 643 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 FLT4P35916 1363 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 IKBKBO14920 756 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 HNRNPCP07910 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 RPSAP08865 295 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 KRT4P19013 534 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 ITIH3Q06033 890 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 TFCP2Q12800 502 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 TDRD12Q587J7 1177 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 LRRC27Q9C0I9 530 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 YIPF3Q9GZM5 350 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 TPP2P29144 1249 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 RFC1P35251 1148 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 TUBA4AP68366 448 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 CYLC2Q14093 348 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 KARSQ15046 597 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 NCOA5Q9HCD5 579 aaKnown RBP9.15□□□□□ -0.94
NECAP1-227ENST00000640648 PAG1Q9NWQ8 432 aa9.15□□□□□ -0.94
NECAP1-227ENST00000640648 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 HSPA9P38646 679 aaKnown RBP9.15□□□□□ -0.95
NECAP1-227ENST00000640648 COG7P83436 770 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 IFT88Q13099 833 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 CFAP221Q4G0U5 840 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 CFAP157Q5JU67 520 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 MFSD6Q6ZSS7 791 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.95
NECAP1-227ENST00000640648 TSG101Q99816 390 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 C10orf88Q9H8K7 445 aa9.15□□□□□ -0.95
NECAP1-227ENST00000640648 CCDC194A0A1B0GVG4 234 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 MTIF2P46199 727 aaKnown RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 PSEN1P49768 467 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 NEK2P51955 445 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 MAP3K7CLP57077 242 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 ROR2Q01974 943 aaKnown RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 NUGGCQ68CJ6 796 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 CDC37L1Q7L3B6 337 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 IWS1Q96ST2 819 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 KDM5CP41229 1560 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 TTC21AQ8NDW8 1320 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 A0A1W2PRG0 241 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 C21orf2O43822 256 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 SLC5A1P13866 664 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 H2AFXP16104 143 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 POLD1P28340 1107 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 STX17P56962 302 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 ZBTB16Q05516 673 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 DKK3Q9UBP4 350 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 YTHDC2Q9H6S0 1430 aaKnown RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 CCDC169A6NNP5 214 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 MAP3K7O43318 606 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 CLTAP09496 248 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 IDEP14735 1019 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 MAGEA8P43361 318 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 OTUD7BQ6GQQ9 843 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 DHX32Q7L7V1 743 aaKnown RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 KRT28Q7Z3Y7 464 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 CATIPQ7Z7H3 387 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 TRIM42Q8IWZ5 723 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms