RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 PATL2C9JE40 543 aaKnown RBP13.31□□□□□ -0.28
DDX41-219ENST00000629036 TLR2O60603 784 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 AKR1B1P15121 316 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 GNAT2P19087 354 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 SDSP20132 328 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 RASA1P20936 1047 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 CTGFP29279 349 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 HMGCS2P54868 508 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 BACE1P56817 501 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 MTMR2Q13614 643 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 ABCB5Q2M3G0 1257 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 LRRFIP1Q32MZ4 808 aaKnown RBP13.31□□□□□ -0.28
DDX41-219ENST00000629036 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
DDX41-219ENST00000629036 C17orf99Q6UX52 265 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 AGTPBP1Q9UPW5 1226 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 ZMYM6O95789 1325 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 PLIN4Q96Q06 1357 aa13.31□□□□□ -0.28
DDX41-219ENST00000629036 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 CYP2C8P10632 490 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 BCRP11274 1271 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 SEPT2Q15019 361 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 C12orf42Q96LP6 360 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
DDX41-219ENST00000629036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX41-219ENST00000629036 A0A0C4DFX4 3053 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 IGKV6D-41A0A0C4DH26 115 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 ALX1Q15699 326 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 GADL1Q6ZQY3 521 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
DDX41-219ENST00000629036 FASTKD5Q7L8L6 764 aaKnown RBP13.29□□□□□ -0.28
DDX41-219ENST00000629036 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 CCDC171Q6TFL3 1326 aa13.29□□□□□ -0.28
DDX41-219ENST00000629036 COL6A3P12111 3177 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 USP17L10C9JJH3 530 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
DDX41-219ENST00000629036 TMEM179Q6ZVK1 233 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 ANAPC4Q9UJX5 808 aa13.28□□□□□ -0.28
DDX41-219ENST00000629036 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.28
DDX41-219ENST00000629036 FGRP09769 529 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 HOXA7P31268 230 aaPredicted RBP13.27□□□□□ -0.29
DDX41-219ENST00000629036 TDO2P48775 406 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 SP3Q02447 781 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 PPARAQ07869 468 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 PARK7Q99497 189 aaKnown RBP13.27□□□□□ -0.29
DDX41-219ENST00000629036 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
DDX41-219ENST00000629036 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
DDX41-219ENST00000629036 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.29
DDX41-219ENST00000629036 SMCHD1A6NHR9 2005 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 H0YGN5 161 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 FGAP02671 866 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 VCAM1P19320 739 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
DDX41-219ENST00000629036 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 NAPBQ9H115 298 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 CUL9Q8IWT3 2517 aa13.26□□□□□ -0.29
DDX41-219ENST00000629036 CHMLP26374 656 aa13.25□□□□□ -0.29
DDX41-219ENST00000629036 USP17L2Q6R6M4 530 aa13.25□□□□□ -0.29
DDX41-219ENST00000629036 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
DDX41-219ENST00000629036 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
DDX41-219ENST00000629036 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
DDX41-219ENST00000629036 TMX2Q9Y320 296 aa13.25□□□□□ -0.29
DDX41-219ENST00000629036 PEX10O60683 326 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 PRDM1O75626 825 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
DDX41-219ENST00000629036 APPP05067 770 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 NOVP48745 357 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 ICA1Q05084 483 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 ZYXQ15942 572 aaKnown RBP13.24□□□□□ -0.29
DDX41-219ENST00000629036 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 TBC1D10CQ8IV04 446 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms