RNA–Protein interactions for RNA: ENST00000623236.1

CR392039.3-201, humanhuman

TSL 5 BASIC

Gene CR392039.3, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.3-201ENST00000623236 USP48Q86UV5 1035 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 METTL16Q86W50 562 aaKnown RBP8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 CMTR1Q8N1G2 835 aaKnown RBP8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 CCDC82Q8N4S0 544 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 CCDC17Q96LX7 622 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 AIFM3Q96NN9 605 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 MAP3K14Q99558 947 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 TMEM47Q9BQJ4 181 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 ZSCAN16Q9H4T2 348 aaPredicted RBP8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 GJB4Q9NTQ9 266 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 CNPY2Q9Y2B0 182 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 LAMA4Q16363 1823 aa8.93□□□□□ -0.98
CR392039.3-201ENST00000623236 CCDC88AQ3V6T2 1871 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 SHTN1A0MZ66 631 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 CLRN2A0PK11 232 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TCP10L2B9ZVM9 353 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 UBE2Q2LH0YL09 131 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 PRPF3O43395 683 aaKnown RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 PLEKHA8P1O95397 391 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TOP1P11387 765 aaKnown RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 GUCY1A2P33402 732 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 GRM4Q14833 912 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 SPDYE2Q495Y8 402 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 FKBP1CQ5VVH2 108 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 KRT40Q6A162 431 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TMTC3Q6ZXV5 915 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 ZSCAN29Q8IWY8 852 aaPredicted RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 SRBD1Q8N5C6 995 aaKnown RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TMEM87AQ8NBN3 555 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 PNMA1Q8ND90 353 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 CTCFLQ8NI51 663 aaPredicted RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 FAM151AQ8WW52 585 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 WASF1Q92558 559 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 DPF2Q92785 391 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 CEP95Q96GE4 821 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 GDPD2Q9HCC8 539 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 MTMR4Q9NYA4 1195 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TMOD2Q9NZR1 351 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 STX8Q9UNK0 236 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 V9GY48 417 aaPredicted RBP8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 SCN9AQ15858 1988 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 MYH2Q9UKX2 1941 aa8.92□□□□□ -0.98
CR392039.3-201ENST00000623236 ATRNL1Q5VV63 1379 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 WNT10BO00744 389 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 DEXIO95424 95 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 NCLP19338 710 aaKnown RBP8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 KIF5BP33176 963 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 GMPSP49915 693 aaPredicted RBP8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 GNAQP50148 359 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 KRT85P78386 507 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 PKN1Q16512 942 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 TATDN1Q6P1N9 297 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 SYT17Q9BSW7 474 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 RNF26Q9BY78 433 aaPredicted RBP8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 DNAJC18Q9H819 358 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 MYOZ2Q9NPC6 264 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 GJA3Q9Y6H8 435 aa8.91□□□□□ -0.98
CR392039.3-201ENST00000623236 PLIN4Q96Q06 1357 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 BAZ2AQ9UIF9 1905 aaKnown RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 FIBPO43427 364 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 MYO1BO43795 1136 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 GADD45BO75293 160 aaPredicted RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 LMNB1P20700 586 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 TRIM29Q14134 588 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 KLHL40Q2TBA0 621 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 CERKLQ49MI3 558 aaPredicted RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 RBM26Q5T8P6 1007 aaKnown RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 ATL3Q6DD88 541 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 STAG2Q8N3U4 1231 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 GPT2Q8TD30 523 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 ZNF396Q96N95 335 aaPredicted RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 VEZTQ9HBM0 779 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 MAD2L2Q9UI95 211 aa8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 CNOT7Q9UIV1 285 aaKnown RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 DDX49Q9Y6V7 483 aaKnown RBP8.9□□□□□ -0.98
CR392039.3-201ENST00000623236 CNTNAP1P78357 1384 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 ZNF541Q9H0D2 1346 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 hCG_1642624A0A1W2PR95 340 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 KIF28PB7ZC32 967 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 MPHOSPH10O00566 681 aaKnown RBP8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 TTLL1O95922 423 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 RRP1BQ14684 758 aaKnown RBP8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 SLC35G1Q2M3R5 365 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 PPP4R3BQ5MIZ7 849 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 FAM83AQ86UY5 434 aa8.89□□□□□ -0.99
CR392039.3-201ENST00000623236 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms