RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CASP14P31944 242 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 PAGE5Q96GU1 130 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 ARMT1Q9H993 441 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 GYPCP04921 128 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 CASP1P29466 404 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 AFMP43652 599 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 LMAN1P49257 510 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 RRP12Q5JTH9 1297 aaKnown RBP22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 HDXQ7Z353 690 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 MAGEB6Q8N7X4 407 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 STAG1Q8WVM7 1258 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 SHISA4Q96DD7 197 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 EPSTI1Q96J88 318 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 CTAGE1Q96RT6 745 aa22.24■■□□□ 1.15
PDLIM3-212ENST00000620787 FAM205CA6NFA0 338 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 SEMA3EO15041 775 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 SLC35F6Q8N357 371 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 MSL3Q8N5Y2 521 aaKnown RBP22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 GOLGA5Q8TBA6 731 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 L1RE1Q9UN81 338 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 CTAGE9A4FU28 777 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 PPP1R3GB7ZBB8 358 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 KIF4BQ2VIQ3 1234 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 GIGYF2Q6Y7W6 1299 aaKnown RBP22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 NLRP10Q86W26 655 aa22.23■■□□□ 1.15
PDLIM3-212ENST00000620787 ITIH6Q6UXX5 1313 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 LRP5O75197 1615 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 MYH13Q9UKX3 1938 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 TFRCP02786 760 aaKnown RBP22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 GPTP24298 496 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 DPYDQ12882 1025 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 MCM6Q14566 821 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 SART3Q15020 963 aaKnown RBP22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 CNGA4Q8IV77 575 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 SMYD4Q8IYR2 804 aaPredicted RBP22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 ACRBPQ8NEB7 543 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 CCDC51Q96ER9 411 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 ABCB6Q9NP58 842 aa22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 TTF2Q9UNY4 1162 aaKnown RBP22.22■■□□□ 1.15
PDLIM3-212ENST00000620787 CCDC196A0A1B0GTZ2 297 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 PRKAB2O43741 272 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 HLFQ16534 295 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 FANCBQ8NB91 859 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 CDC5LQ99459 802 aaKnown RBP22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 TRIM75PA6NK02 468 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 ERLIN1O75477 346 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 ABL1P00519 1130 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 ATF3P18847 181 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 FILIP1LQ4L180 1135 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 ZNF654Q8IZM8 581 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 IQUBQ8NA54 791 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 SPATA5Q8NB90 893 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
PDLIM3-212ENST00000620787 FGFR2P21802 821 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 RCAN1P53805 252 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 TUBB4BP68371 445 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 DNAJC10Q8IXB1 793 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 SYMPKQ92797 1274 aaKnown RBP22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 GSDMAQ96QA5 445 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 SUGCTQ9HAC7 445 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 VPS18Q9P253 973 aa22.2■■□□□ 1.15
PDLIM3-212ENST00000620787 ERVK-24P63145 666 aa22.2■■□□□ 1.14
PDLIM3-212ENST00000620787 MAP3K12Q12852 859 aa22.2■■□□□ 1.14
PDLIM3-212ENST00000620787 PUM3Q15397 648 aaKnown RBP22.2■■□□□ 1.14
PDLIM3-212ENST00000620787 EARS2Q5JPH6 523 aaKnown RBP22.2■■□□□ 1.14
PDLIM3-212ENST00000620787 SPATA31A3Q5VYP0 1347 aa22.2■■□□□ 1.14
PDLIM3-212ENST00000620787 ACTN2P35609 894 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 NUP133Q8WUM0 1156 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 LPIN2Q92539 896 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 NAPGQ99747 312 aaPredicted RBP22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 MTA3Q9BTC8 594 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 CWC15Q9P013 229 aaKnown RBP22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 ERICH2A1L162 156 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 N4BP1O75113 896 aaKnown RBP22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 RHOXF2BP0C7M4 288 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 ARHGAP25P42331 645 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 VSNL1P62760 191 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 RASGRF1Q13972 1273 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 TMTC2Q8N394 836 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 LCORLQ8N3X6 602 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 RHOXF2Q9BQY4 288 aa22.19■■□□□ 1.14
PDLIM3-212ENST00000620787 TDO2P48775 406 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 WHAMMP3Q1A5X7 153 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 TMTC1Q8IUR5 882 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 HELBQ8NG08 1087 aaPredicted RBP22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 LCMT1Q9UIC8 334 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 CTNND2Q9UQB3 1225 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 VGLL3A8MV65 326 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 EIF3JO75822 258 aaKnown RBP22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 NUP98P52948 1817 aa22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 RNF26Q9BY78 433 aaPredicted RBP22.18■■□□□ 1.14
PDLIM3-212ENST00000620787 WNT7AO00755 349 aa22.17■■□□□ 1.14
PDLIM3-212ENST00000620787 CCT6AP40227 531 aaKnown RBP22.17■■□□□ 1.14
PDLIM3-212ENST00000620787 KRT31Q15323 416 aa22.17■■□□□ 1.14
PDLIM3-212ENST00000620787 ABHD10Q9NUJ1 306 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms