RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
COPS7B-224ENST00000620578 EPS15P42566 896 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
COPS7B-224ENST00000620578 RNF181Q9P0P0 153 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
COPS7B-224ENST00000620578 LMNB1P20700 586 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
COPS7B-224ENST00000620578 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
COPS7B-224ENST00000620578 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 H3BQV1 296 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 HLA-DOAP06340 250 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
COPS7B-224ENST00000620578 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
COPS7B-224ENST00000620578 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
COPS7B-224ENST00000620578 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
COPS7B-224ENST00000620578 NEDD1Q8NHV4 660 aa17.71■□□□□ 0.43
COPS7B-224ENST00000620578 TRPM4Q8TD43 1214 aa17.71■□□□□ 0.43
COPS7B-224ENST00000620578 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
COPS7B-224ENST00000620578 PI4KBQ9UBF8 816 aa17.71■□□□□ 0.43
COPS7B-224ENST00000620578 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
COPS7B-224ENST00000620578 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
COPS7B-224ENST00000620578 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
COPS7B-224ENST00000620578 RAD21O60216 631 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 CCDC84Q86UT8 332 aaPredicted RBP17.7■□□□□ 0.42
COPS7B-224ENST00000620578 SHISA4Q96DD7 197 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 ZBED3Q96IU2 234 aaPredicted RBP17.7■□□□□ 0.42
COPS7B-224ENST00000620578 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 SIPA1L1O43166 1804 aa17.7■□□□□ 0.42
COPS7B-224ENST00000620578 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
COPS7B-224ENST00000620578 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
COPS7B-224ENST00000620578 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
COPS7B-224ENST00000620578 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
COPS7B-224ENST00000620578 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 TMOD2Q9NZR1 351 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 RASA3Q14644 834 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 SEPT2Q15019 361 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
COPS7B-224ENST00000620578 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 GBP4Q96PP9 640 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 KCNJ14Q9UNX9 436 aa17.69■□□□□ 0.42
COPS7B-224ENST00000620578 HIRAP54198 1017 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 FUT2Q10981 343 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 GPR162Q16538 588 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 ZNF287Q9HBT7 754 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 HACL1Q9UJ83 578 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 SBF1O95248 1867 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 FIBPO43427 364 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 GADD45BO75293 160 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 IFNAR1P17181 557 aa17.68■□□□□ 0.42
COPS7B-224ENST00000620578 ZNF280AP59817 542 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 DHX36Q9H2U1 1008 aaKnown RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 FRMPD2Q68DX3 1309 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-224ENST00000620578 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 ADAMTS3O15072 1205 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 ENTPD3O75355 529 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 PDCP20941 246 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 SSRP1Q08945 709 aaKnown RBP17.67■□□□□ 0.42
COPS7B-224ENST00000620578 FAM151AQ8WW52 585 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 MTA3Q9BTC8 594 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 TRIM34Q9BYJ4 488 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 PCNTO95613 3336 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
COPS7B-224ENST00000620578 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
COPS7B-224ENST00000620578 MYO1BO43795 1136 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 GH2P01242 217 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 CLEC17AQ6ZS10 378 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 LMBRD1Q9NUN5 540 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-224ENST00000620578 CYTH3O43739 400 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 FMNL1O95466 1100 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-224ENST00000620578 RESTQ13127 1097 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 PKN1Q16512 942 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 USP48Q86UV5 1035 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 FBXO18Q8NFZ0 1043 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-224ENST00000620578 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
COPS7B-224ENST00000620578 ANGEL2Q5VTE6 544 aaKnown RBP17.65■□□□□ 0.42
COPS7B-224ENST00000620578 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
COPS7B-224ENST00000620578 DPF2Q92785 391 aa17.65■□□□□ 0.42
COPS7B-224ENST00000620578 EHD4Q9H223 541 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms