RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 BAG3O95817 575 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 XBP1P17861 261 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 GTF2IP78347 998 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 ZNF174Q15697 407 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
CIITA-212ENST00000618207 MXD3Q9BW11 206 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 GOLGA8HP0CJ92 632 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 TSPY3P0CV98 308 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 TSPY8P0CW00 308 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 ADRA2BP18089 450 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 LMOD1P29536 600 aaPredicted RBP14.25□□□□□ -0.13
CIITA-212ENST00000618207 FUT2Q10981 343 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 PICALMQ13492 652 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
CIITA-212ENST00000618207 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
CIITA-212ENST00000618207 TBC1D16Q8TBP0 767 aa14.25□□□□□ -0.13
CIITA-212ENST00000618207 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
CIITA-212ENST00000618207 POLRMTO00411 1230 aaKnown RBP14.24□□□□□ -0.13
CIITA-212ENST00000618207 CUTAO60888 179 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 KRT2P35908 639 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 TEX11Q8IYF3 940 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 MTA3Q9BTC8 594 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 ORC4O43929 436 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 SMC2O95347 1197 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 BRD2P25440 801 aaKnown RBP14.24□□□□□ -0.13
CIITA-212ENST00000618207 NLRP5P59047 1200 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 ZNF827Q17R98 1081 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
CIITA-212ENST00000618207 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
CIITA-212ENST00000618207 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
CIITA-212ENST00000618207 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 FGRP09769 529 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 CRY2Q49AN0 593 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 AMOTL1Q8IY63 956 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 RASGRP4Q8TDF6 673 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 SERTAD1Q9UHV2 236 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 HPSEQ9Y251 543 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 PCDHA5Q9Y5H7 936 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 APBA3O96018 575 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 CASP1P29466 404 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 FBXO2Q9UK22 296 aaPredicted RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 CAVIN2O95810 425 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 NLRP12P59046 1061 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 CACTINQ8WUQ7 758 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 STAMQ92783 540 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 PHF20Q9BVI0 1012 aa14.23□□□□□ -0.13
CIITA-212ENST00000618207 RTFDC1Q9BY42 306 aaPredicted RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 MKRN1Q9UHC7 482 aaKnown RBP14.23□□□□□ -0.13
CIITA-212ENST00000618207 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 DDAH1O94760 285 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 LDHCP07864 332 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 CALM1P0DP23 149 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 CALM2P0DP24 149 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 CALM3P0DP25 149 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 SCNN1DP51172 638 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 GSTO1P78417 241 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 NID2Q14112 1375 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 ATP1A3P13637 1013 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 PTPREP23469 700 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 AFMP43652 599 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 EIF6P56537 245 aaKnown RBP14.22□□□□□ -0.13
CIITA-212ENST00000618207 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
CIITA-212ENST00000618207 DHX58Q96C10 678 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 VAT1LQ9HCJ6 419 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 FAM13BQ9NYF5 915 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 IFNKQ9P0W0 207 aa14.22□□□□□ -0.13
CIITA-212ENST00000618207 PPEF1O14829 653 aaPredicted RBP14.21□□□□□ -0.13
CIITA-212ENST00000618207 BBOX1O75936 387 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
CIITA-212ENST00000618207 SCG2P13521 617 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 MCM7P33993 719 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 HOMER1Q86YM7 354 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 KIAA1524Q8TCG1 905 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
CIITA-212ENST00000618207 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms