RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CA12O43570 354 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 FGRP09769 529 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 USP14P54578 494 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 BACE1P56817 501 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 TFAP4Q01664 338 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 TRDNQ13061 729 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 MTMR2Q13614 643 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 RRP12Q5JTH9 1297 aaKnown RBP15.69■□□□□ 0.1
MDC1-209ENST00000613547 RNF20Q5VTR2 975 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 GADL1Q6ZQY3 521 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 PRRT2Q7Z6L0 340 aaPredicted RBP15.69■□□□□ 0.1
MDC1-209ENST00000613547 TBC1D10CQ8IV04 446 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 BRI3BPQ8WY22 251 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 ESR2Q92731 530 aa15.69■□□□□ 0.1
MDC1-209ENST00000613547 GUCY1A2P33402 732 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 HMGCS2P54868 508 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 ATP2B2Q01814 1243 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 PROCA1Q8NCQ7 364 aaPredicted RBP15.68■□□□□ 0.1
MDC1-209ENST00000613547 NEDD1Q8NHV4 660 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 KRT23Q9C075 422 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
MDC1-209ENST00000613547 PLIN4Q96Q06 1357 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 CYP21A2P08686 494 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 PABPC4Q13310 644 aaKnown RBP eCLIP15.67■□□□□ 0.1
MDC1-209ENST00000613547 SH3D19Q5HYK7 790 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 FAM47AQ5JRC9 791 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 RALYLQ86SE5 291 aaKnown RBP15.67■□□□□ 0.1
MDC1-209ENST00000613547 ANKRD23Q86SG2 305 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 NBPF3Q9H094 633 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 ZCCHC17Q9NP64 241 aaKnown RBP15.67■□□□□ 0.1
MDC1-209ENST00000613547 WBP1LQ9NX94 342 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 SAGE1Q9NXZ1 904 aa15.67■□□□□ 0.1
MDC1-209ENST00000613547 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
MDC1-209ENST00000613547 EPB41L2O43491 1005 aaKnown RBP15.66■□□□□ 0.1
MDC1-209ENST00000613547 EEF2P13639 858 aaKnown RBP15.66■□□□□ 0.1
MDC1-209ENST00000613547 ZKSCAN1P17029 563 aaPredicted RBP15.66■□□□□ 0.1
MDC1-209ENST00000613547 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 AGTPBP1Q9UPW5 1226 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 TMX2Q9Y320 296 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 NEDD4P46934 1319 aa15.66■□□□□ 0.1
MDC1-209ENST00000613547 KDM4AO75164 1064 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 TTLL1O95922 423 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
MDC1-209ENST00000613547 CREB3L3Q68CJ9 461 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 CLEC10AQ8IUN9 316 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 ACER1Q8TDN7 264 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 CEP95Q96GE4 821 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 PTPN18Q99952 460 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.65■□□□□ 0.1
MDC1-209ENST00000613547 GOPCQ9HD26 462 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 STX8Q9UNK0 236 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 SLC45A1Q9Y2W3 748 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 CEP350Q5VT06 3117 aa15.65■□□□□ 0.1
MDC1-209ENST00000613547 IGKV6D-41A0A0C4DH26 115 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 BTBD19C9JJ37 291 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 PDHXO00330 501 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 SLC27A2O14975 620 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 TRPA1O75762 1119 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 MOGSQ13724 837 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 TAF1CQ15572 869 aaPredicted RBP15.64■□□□□ 0.09
MDC1-209ENST00000613547 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 NCOA7Q8NI08 942 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 LPAR1Q92633 364 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 C12orf42Q96LP6 360 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 ZFYVE28Q9HCC9 887 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 TCP11L1Q9NUJ3 509 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 PNMA3Q9UL41 463 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 ATAD5Q96QE3 1844 aa15.64■□□□□ 0.09
MDC1-209ENST00000613547 A0A1W2PRG0 241 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 B4E1Z4 1266 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 E7EWF7 191 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 RAD21O60216 631 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
MDC1-209ENST00000613547 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
MDC1-209ENST00000613547 MCCP23508 829 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 GPAT2Q6NUI2 795 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 SIAH1Q8IUQ4 282 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 PARK7Q99497 189 aaKnown RBP15.63■□□□□ 0.09
MDC1-209ENST00000613547 UBAC1Q9BSL1 405 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 EMILIN3Q9NT22 766 aa15.63■□□□□ 0.09
MDC1-209ENST00000613547 LAMA4Q16363 1823 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 VCAM1P19320 739 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 OSBPP22059 807 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 IRX3P78415 501 aaPredicted RBP15.62■□□□□ 0.09
MDC1-209ENST00000613547 KRT32Q14532 448 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
MDC1-209ENST00000613547 TREML2Q5T2D2 321 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 MKL1Q969V6 931 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 TTC14Q96N46 770 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms