RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 WBP1LQ9NX94 342 aa20.5■□□□□ 0.87
SMG9-204ENST00000596714 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
SMG9-204ENST00000596714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMG9-204ENST00000596714 LAMA4Q16363 1823 aa20.5■□□□□ 0.87
SMG9-204ENST00000596714 PHIPQ8WWQ0 1821 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 EIF5BO60841 1220 aaKnown RBP20.49■□□□□ 0.87
SMG9-204ENST00000596714 REC8O95072 547 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 USP14P54578 494 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 BACE1P56817 501 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 TFAP4Q01664 338 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 MTMR2Q13614 643 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 GADL1Q6ZQY3 521 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 BRI3BPQ8WY22 251 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 CNNM2Q9H8M5 875 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 ZCCHC17Q9NP64 241 aaKnown RBP20.49■□□□□ 0.87
SMG9-204ENST00000596714 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
SMG9-204ENST00000596714 FGRP09769 529 aa20.48■□□□□ 0.87
SMG9-204ENST00000596714 GUCY1A2P33402 732 aa20.48■□□□□ 0.87
SMG9-204ENST00000596714 TRDNQ13061 729 aa20.48■□□□□ 0.87
SMG9-204ENST00000596714 PROCA1Q8NCQ7 364 aaPredicted RBP20.48■□□□□ 0.87
SMG9-204ENST00000596714 ESR2Q92731 530 aa20.48■□□□□ 0.87
SMG9-204ENST00000596714 LSG1Q9H089 658 aaKnown RBP20.48■□□□□ 0.87
SMG9-204ENST00000596714 RBM8AQ9Y5S9 174 aaKnown RBP20.48■□□□□ 0.87
SMG9-204ENST00000596714 PCNTO95613 3336 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 HMGCS2P54868 508 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 ATP2B2Q01814 1243 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMG9-204ENST00000596714 FAM47AQ5JRC9 791 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 RNF20Q5VTR2 975 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 USP17L2Q6R6M4 530 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 TBC1D10CQ8IV04 446 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 NEDD1Q8NHV4 660 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 KRT23Q9C075 422 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 KIAA1683Q9H0B3 1180 aa20.47■□□□□ 0.87
SMG9-204ENST00000596714 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
SMG9-204ENST00000596714 IGF2BP3O00425 579 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMG9-204ENST00000596714 TRPA1O75762 1119 aa20.46■□□□□ 0.87
SMG9-204ENST00000596714 SH3D19Q5HYK7 790 aa20.46■□□□□ 0.87
SMG9-204ENST00000596714 RNF186Q9NXI6 227 aa20.46■□□□□ 0.87
SMG9-204ENST00000596714 BTBD19C9JJ37 291 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 HSPA1AP0DMV8 641 aaKnown RBP20.45■□□□□ 0.86
SMG9-204ENST00000596714 HSPA1BP0DMV9 641 aaKnown RBP20.45■□□□□ 0.86
SMG9-204ENST00000596714 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
SMG9-204ENST00000596714 ZYXQ15942 572 aaKnown RBP20.45■□□□□ 0.86
SMG9-204ENST00000596714 PTPN18Q99952 460 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 NBPF3Q9H094 633 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 INCENPQ9NQS7 918 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 PNMA3Q9UL41 463 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
SMG9-204ENST00000596714 PDHXO00330 501 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 TTLL1O95922 423 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 CYP21A2P08686 494 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 TAF1CQ15572 869 aaPredicted RBP20.44■□□□□ 0.86
SMG9-204ENST00000596714 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
SMG9-204ENST00000596714 IQCA1Q86XH1 822 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 FAM43AQ8N2R8 423 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 ACER1Q8TDN7 264 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 GOPCQ9HD26 462 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 SLC45A1Q9Y2W3 748 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 PTPRFP10586 1907 aa20.44■□□□□ 0.86
SMG9-204ENST00000596714 MOGSQ13724 837 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 CLEC10AQ8IUN9 316 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 LPAR1Q92633 364 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 PARK7Q99497 189 aaKnown RBP20.43■□□□□ 0.86
SMG9-204ENST00000596714 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMG9-204ENST00000596714 ZFYVE28Q9HCC9 887 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 MTMR4Q9NYA4 1195 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 SYNPO2Q9UMS6 1093 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 TMX2Q9Y320 296 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 NEDD4P46934 1319 aa20.43■□□□□ 0.86
SMG9-204ENST00000596714 GREB1LQ9C091 1923 aaPredicted RBP20.43■□□□□ 0.86
SMG9-204ENST00000596714 IGKV6D-41A0A0C4DH26 115 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
SMG9-204ENST00000596714 OSBPP22059 807 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 CTCFP49711 727 aaPredicted RBP20.42■□□□□ 0.86
SMG9-204ENST00000596714 C12orf42Q96LP6 360 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 EMILIN3Q9NT22 766 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 CLIP2Q9UDT6 1046 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
SMG9-204ENST00000596714 LOC285556D6RIA3 1793 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 B4E1Z4 1266 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 EPB41L2O43491 1005 aaKnown RBP20.41■□□□□ 0.86
SMG9-204ENST00000596714 RAD21O60216 631 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 KDM4AO75164 1064 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 IRX3P78415 501 aaPredicted RBP20.41■□□□□ 0.86
SMG9-204ENST00000596714 CREB3L3Q68CJ9 461 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 GPAT2Q6NUI2 795 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 NCOA7Q8NI08 942 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 CFHR5Q9BXR6 569 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 VCPKMTQ9H867 229 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 TCP11L1Q9NUJ3 509 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 TACC3Q9Y6A5 838 aa20.41■□□□□ 0.86
SMG9-204ENST00000596714 E7EWF7 191 aa20.4■□□□□ 0.86
SMG9-204ENST00000596714 SLC27A2O14975 620 aa20.4■□□□□ 0.86
SMG9-204ENST00000596714 NECTIN1Q15223 517 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms