RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
RETREG3-211ENST00000591547 BADQ92934 168 aa12.07□□□□□ -0.48
RETREG3-211ENST00000591547 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-211ENST00000591547 TNNQ9UQP3 1299 aa12.07□□□□□ -0.48
RETREG3-211ENST00000591547 MYH1P12882 1939 aa12.07□□□□□ -0.48
RETREG3-211ENST00000591547 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
RETREG3-211ENST00000591547 PTPREP23469 700 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
RETREG3-211ENST00000591547 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
RETREG3-211ENST00000591547 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 LPAR1Q92633 364 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 NOL10Q9BSC4 688 aaKnown RBP12.06□□□□□ -0.48
RETREG3-211ENST00000591547 TRIM34Q9BYJ4 488 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 DHX36Q9H2U1 1008 aaKnown RBP12.06□□□□□ -0.48
RETREG3-211ENST00000591547 PRDM6Q9NQX0 595 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 RAPGEFL1Q9UHV5 662 aa12.06□□□□□ -0.48
RETREG3-211ENST00000591547 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
RETREG3-211ENST00000591547 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 SLC39A5Q6ZMH5 540 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
RETREG3-211ENST00000591547 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
RETREG3-211ENST00000591547 TRIM43BA6NCK2 446 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 SLC15A5A6NIM6 579 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 DNM1LO00429 736 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 BAG3O95817 575 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 ITGB8P26012 769 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 EPHB4P54760 987 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 PPP4CP60510 307 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 EVX2Q03828 476 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 RAB3GAP1Q15042 981 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 CATSPERGQ6ZRH7 1159 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-211ENST00000591547 FEZ1Q99689 392 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 DBNDD2Q9BQY9 259 aa12.04□□□□□ -0.48
RETREG3-211ENST00000591547 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-211ENST00000591547 BCAR3O75815 825 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 IGHA2P01877 340 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 UQCRFS1P1P0C7P4 283 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 CYBAP13498 195 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 FOSL2P15408 326 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 VCAM1P19320 739 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 ZAP70P43403 619 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 GRB14Q14449 540 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 MIGA1Q8NAN2 632 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 USP38Q8NB14 1042 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
RETREG3-211ENST00000591547 PDLIM7Q9NR12 457 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
RETREG3-211ENST00000591547 COBLO75128 1261 aa12.02□□□□□ -0.49
RETREG3-211ENST00000591547 GLRX3O76003 335 aaKnown RBP12.02□□□□□ -0.49
RETREG3-211ENST00000591547 HOXC6P09630 235 aa12.02□□□□□ -0.49
RETREG3-211ENST00000591547 CCNA1P78396 465 aa12.02□□□□□ -0.49
RETREG3-211ENST00000591547 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.49
RETREG3-211ENST00000591547 MTX1Q13505 466 aa12.02□□□□□ -0.49
RETREG3-211ENST00000591547 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-211ENST00000591547 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-211ENST00000591547 MUC3AQ02505 3323 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 PLCG2P16885 1265 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 CYP7A1P22680 504 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 ADORA2AP29274 412 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 TATDN1Q6P1N9 297 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
RETREG3-211ENST00000591547 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
RETREG3-211ENST00000591547 IVNS1ABPQ9Y6Y0 642 aa12.01□□□□□ -0.49
RETREG3-211ENST00000591547 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
RETREG3-211ENST00000591547 SMCHD1A6NHR9 2005 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 A0A1W2PRG0 241 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 KBTBD13C9JR72 458 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 MSCO60682 206 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 GNAI3P08754 354 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 SHMT1P34896 483 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 PLCD1P51178 756 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
RETREG3-211ENST00000591547 TLE2Q04725 743 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 GRIN2CQ14957 1233 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 LRRC41Q15345 812 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms