RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 MYH2Q9UKX2 1941 aa21.58■■□□□ 1.05
RETREG3-205ENST00000586870 PRKAB2O43741 272 aa21.58■■□□□ 1.04
RETREG3-205ENST00000586870 AKNAD1Q5T1N1 836 aa21.58■■□□□ 1.04
RETREG3-205ENST00000586870 RGMBQ6NW40 437 aa21.58■■□□□ 1.04
RETREG3-205ENST00000586870 CYB5R4Q7L1T6 521 aa21.58■■□□□ 1.04
RETREG3-205ENST00000586870 MIGA2Q7L4E1 593 aa21.58■■□□□ 1.04
RETREG3-205ENST00000586870 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.04
RETREG3-205ENST00000586870 OSBPL5Q9H0X9 879 aaPredicted RBP21.58■■□□□ 1.04
RETREG3-205ENST00000586870 SH2B2O14492 632 aaPredicted RBP21.57■■□□□ 1.04
RETREG3-205ENST00000586870 FIBPO43427 364 aa21.57■■□□□ 1.04
RETREG3-205ENST00000586870 FERMT3Q86UX7 667 aa21.57■■□□□ 1.04
RETREG3-205ENST00000586870 STAG1Q8WVM7 1258 aa21.57■■□□□ 1.04
RETREG3-205ENST00000586870 HHIPL1Q96JK4 782 aa21.57■■□□□ 1.04
RETREG3-205ENST00000586870 NCOA5Q9HCD5 579 aaKnown RBP21.57■■□□□ 1.04
RETREG3-205ENST00000586870 GOLGA8BA8MQT2 603 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 B4E1Z4 1266 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 USP2O75604 605 aaPredicted RBP21.56■■□□□ 1.04
RETREG3-205ENST00000586870 RESTQ13127 1097 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 CYP4F22Q6NT55 531 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 KLRG1Q96E93 195 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 DHX36Q9H2U1 1008 aaKnown RBP21.56■■□□□ 1.04
RETREG3-205ENST00000586870 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 ELP1O95163 1332 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 FLT1P17948 1338 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 NEDD4P46934 1319 aa21.56■■□□□ 1.04
RETREG3-205ENST00000586870 DDTLA6NHG4 134 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-205ENST00000586870 MFSD6Q6ZSS7 791 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 CCDC102AQ96A19 550 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 CAPNS2Q96L46 248 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 TRIM34Q9BYJ4 488 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 ZNF341Q9BYN7 854 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 SCAND2PQ9GZW5 306 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-205ENST00000586870 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-205ENST00000586870 SAP30BPQ9UHR5 308 aaKnown RBP21.55■■□□□ 1.04
RETREG3-205ENST00000586870 VEGFBP49765 207 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 CTDSPL2Q05D32 466 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 ANKRD13AQ8IZ07 590 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 DNAJC5GQ8N7S2 189 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 RGS22Q8NE09 1264 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 SLC10A4Q96EP9 437 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 ANAPC4Q9UJX5 808 aa21.55■■□□□ 1.04
RETREG3-205ENST00000586870 ECM29Q5VYK3 1845 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 HLA-DOAP06340 250 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 LIFRP42702 1097 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 MAP3K9P80192 1104 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 MAP3K11Q16584 847 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 GIMAP6Q6P9H5 292 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 LRSAM1Q6UWE0 723 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 SH3BP5LQ7L8J4 393 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 SGMS1Q86VZ5 419 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 IGDCC4Q8TDY8 1250 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 CSADQ9Y600 493 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 MAST2Q6P0Q8 1798 aa21.54■■□□□ 1.04
RETREG3-205ENST00000586870 WRNIP1Q96S55 665 aa21.53■■□□□ 1.04
RETREG3-205ENST00000586870 PI4KBQ9UBF8 816 aa21.53■■□□□ 1.04
RETREG3-205ENST00000586870 UNCXA6NJT0 531 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 POLR3DP05423 398 aaPredicted RBP21.52■■□□□ 1.04
RETREG3-205ENST00000586870 PPARAQ07869 468 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 LDLRAD1Q5T700 205 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 CRACR2BQ8N4Y2 399 aaPredicted RBP21.52■■□□□ 1.04
RETREG3-205ENST00000586870 SDR42E1Q8WUS8 393 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.52■■□□□ 1.04
RETREG3-205ENST00000586870 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 TRPM7Q96QT4 1865 aa21.52■■□□□ 1.04
RETREG3-205ENST00000586870 CPLX1O14810 134 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 FDPSP14324 419 aaKnown RBP21.51■■□□□ 1.03
RETREG3-205ENST00000586870 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 TMEM67Q5HYA8 995 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 AMOTL1Q8IY63 956 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 MCM9Q9NXL9 1143 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 SSC5DA1L4H1 1573 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 KDM4AO75164 1064 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 LETM1O95202 739 aaPredicted RBP21.51■■□□□ 1.03
RETREG3-205ENST00000586870 CCDC183Q5T5S1 534 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 FOXP4Q8IVH2 680 aaPredicted RBP21.51■■□□□ 1.03
RETREG3-205ENST00000586870 NKX2-3Q8TAU0 364 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 LY9Q9HBG7 655 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 ATP8A2Q9NTI2 1148 aa21.51■■□□□ 1.03
RETREG3-205ENST00000586870 PAPPA2Q9BXP8 1791 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 ATRNL1Q5VV63 1379 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 SYCE3A1L190 88 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 IFIT3O14879 490 aaKnown RBP21.5■■□□□ 1.03
RETREG3-205ENST00000586870 CDKL5O76039 1030 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 ATL3Q6DD88 541 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 FAM173BQ6P4H8 233 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
RETREG3-205ENST00000586870 APOA5Q6Q788 366 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 INCENPQ9NQS7 918 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 CFAP45Q9UL16 551 aa21.5■■□□□ 1.03
RETREG3-205ENST00000586870 PCP11498 1178 aaKnown RBP21.49■■□□□ 1.03
RETREG3-205ENST00000586870 METAP2P50579 478 aaKnown RBP eCLIP21.49■■□□□ 1.03
RETREG3-205ENST00000586870 NOGQ13253 232 aa21.49■■□□□ 1.03
RETREG3-205ENST00000586870 SART3Q15020 963 aaKnown RBP21.49■■□□□ 1.03
RETREG3-205ENST00000586870 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
RETREG3-205ENST00000586870 TMTC2Q8N394 836 aa21.49■■□□□ 1.03
RETREG3-205ENST00000586870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.49■■□□□ 1.03
RETREG3-205ENST00000586870 CLMNQ96JQ2 1002 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms