RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TTLL12Q14166 644 aaPredicted RBP14.9□□□□□ -0.02
VMP1-202ENST00000585847 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 STAG1Q8WVM7 1258 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
VMP1-202ENST00000585847 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.02
VMP1-202ENST00000585847 PTPRFP10586 1907 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 NEDD4P46934 1319 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 CTNND1O60716 968 aaKnown RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 SLC3A2P08195 630 aaKnown RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 RALYLQ86SE5 291 aaKnown RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 CCDC84Q86UT8 332 aaPredicted RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 ANKRD13AQ8IZ07 590 aa14.89□□□□□ -0.03
VMP1-202ENST00000585847 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
VMP1-202ENST00000585847 INTS4Q96HW7 963 aaKnown RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 NEK1Q96PY6 1258 aa14.89□□□□□ -0.03
VMP1-202ENST00000585847 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
VMP1-202ENST00000585847 UNCXA6NJT0 531 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 ORC4O43929 436 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
VMP1-202ENST00000585847 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 CERKLQ49MI3 558 aaPredicted RBP14.88□□□□□ -0.03
VMP1-202ENST00000585847 AKNAD1Q5T1N1 836 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 RGMBQ6NW40 437 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 SCYL3Q8IZE3 742 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 ELP3Q9H9T3 547 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 ZNF287Q9HBT7 754 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
VMP1-202ENST00000585847 ZBTB21Q9ULJ3 1066 aa14.88□□□□□ -0.03
VMP1-202ENST00000585847 IGKV6D-41A0A0C4DH26 115 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 FAM155AB1AL88 458 aaPredicted RBP14.87□□□□□ -0.03
VMP1-202ENST00000585847 GH2P01242 217 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 HSP90AA1P07900 732 aaKnown RBP14.87□□□□□ -0.03
VMP1-202ENST00000585847 ZNF157P51786 506 aaPredicted RBP14.87□□□□□ -0.03
VMP1-202ENST00000585847 DHX32Q7L7V1 743 aaKnown RBP14.87□□□□□ -0.03
VMP1-202ENST00000585847 RASAL3Q86YV0 1011 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 NCOA7Q8NI08 942 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 TTC14Q96N46 770 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 KRT23Q9C075 422 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 PDRG1Q9NUG6 133 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
VMP1-202ENST00000585847 SPDYE5A6NIY4 337 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 E7EWF7 191 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 PTPRAP18433 802 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 MCM5P33992 734 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 SEPT2Q15019 361 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 ABCB5Q2M3G0 1257 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 CLEC10AQ8IUN9 316 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 CCDC17Q96LX7 622 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 ZIC5Q96T25 663 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 TRIM34Q9BYJ4 488 aa14.86□□□□□ -0.03
VMP1-202ENST00000585847 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 SLC10A3P09131 477 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 PDE4BQ07343 736 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
VMP1-202ENST00000585847 ADCK5Q3MIX3 580 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 NEDD1Q8NHV4 660 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 WNK4Q96J92 1243 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 MKNK2Q9HBH9 465 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 IL17RBQ9NRM6 502 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 GINM1Q9NU53 330 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 CSADQ9Y600 493 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
VMP1-202ENST00000585847 B4E1Z4 1266 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 NOVP48745 357 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 RCAN1P53805 252 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 TFAP4Q01664 338 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 KIF23Q02241 960 aaPredicted RBP14.84□□□□□ -0.03
VMP1-202ENST00000585847 SPRYD7Q5W111 196 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 MFSD6Q6ZSS7 791 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 CYB5R4Q7L1T6 521 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 ERO1BQ86YB8 467 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 MB21D2Q8IYB1 491 aaPredicted RBP14.84□□□□□ -0.03
VMP1-202ENST00000585847 OPTNQ96CV9 577 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 SLC10A4Q96EP9 437 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 AGXT2Q9BYV1 514 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 UPF3BQ9BZI7 483 aaKnown RBP14.84□□□□□ -0.03
VMP1-202ENST00000585847 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
VMP1-202ENST00000585847 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
VMP1-202ENST00000585847 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
VMP1-202ENST00000585847 A0A1W2PRG0 241 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 NMT2O60551 498 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 TRPA1O75762 1119 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 ASNSP08243 561 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 ANTXR2P58335 489 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 CUL4AQ13619 759 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 CCDC178Q5BJE1 867 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 RRP12Q5JTH9 1297 aaKnown RBP14.83□□□□□ -0.04
VMP1-202ENST00000585847 TMEM179Q6ZVK1 233 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 ZNF444Q8N0Y2 327 aaPredicted RBP14.83□□□□□ -0.04
VMP1-202ENST00000585847 ACER1Q8TDN7 264 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 ZSWIM5Q9P217 1185 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 ZHX2Q9Y6X8 837 aa14.83□□□□□ -0.04
VMP1-202ENST00000585847 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms