RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 HPSEQ9Y251 543 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 CLIC4Q9Y696 253 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 ECM29Q5VYK3 1845 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 SNAP23O00161 211 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 IKBKBO14920 756 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 RANBP6O60518 1105 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 ZNF202O95125 648 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 TRAPPC10P48553 1259 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 NFIXQ14938 502 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 IQCB1Q15051 598 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 PTPAQ15257 358 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 CTR9Q6PD62 1173 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 DZIP1Q86YF9 867 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 GOLPH3LQ9H4A5 285 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 DCP1AQ9NPI6 582 aaPredicted RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 SH3GLB2Q9NR46 395 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 SRP68Q9UHB9 627 aaKnown RBP9.51□□□□□ -0.89
SKA2-203ENST00000578105 AFF2P51816 1311 aa9.51□□□□□ -0.89
SKA2-203ENST00000578105 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
SKA2-203ENST00000578105 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 SYKP43405 635 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 ZNF75DP51815 510 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 NLRP12P59046 1061 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 GALNT17Q6IS24 598 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 ADGRA1Q86SQ6 560 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 DIS3L2Q8IYB7 885 aaKnown RBP9.5□□□□□ -0.89
SKA2-203ENST00000578105 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 ENAHQ8N8S7 591 aaPredicted RBP9.5□□□□□ -0.89
SKA2-203ENST00000578105 TRIML1Q8N9V2 468 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
SKA2-203ENST00000578105 SDR42E1Q8WUS8 393 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 PRIMPOLQ96LW4 560 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 LZTS2Q9BRK4 669 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 TRIM5Q9C035 493 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 SPTLC3Q9NUV7 552 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 IMPACTQ9P2X3 320 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 TUBE1Q9UJT0 475 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.5□□□□□ -0.89
SKA2-203ENST00000578105 COL4A1P02462 1669 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 LRRC37AA6NMS7 1700 aa9.5□□□□□ -0.89
SKA2-203ENST00000578105 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
SKA2-203ENST00000578105 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 USP17L21D6R901 530 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 IL1R1P14778 569 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 PFKFB1P16118 471 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 PTPREP23469 700 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 CALML3P27482 149 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 SMARCA1P28370 1054 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 KRT2P35908 639 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 NDUFA8P51970 172 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 FOSBP53539 338 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 GSDMDP57764 484 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 TROAPQ12815 778 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 PRR5LQ6MZQ0 368 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 TMTC3Q6ZXV5 915 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 PHKBQ93100 1093 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 FERMT2Q96AC1 680 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 SRPRBQ9Y5M8 271 aaKnown RBP9.49□□□□□ -0.89
SKA2-203ENST00000578105 TACC3Q9Y6A5 838 aa9.49□□□□□ -0.89
SKA2-203ENST00000578105 MYH6P13533 1939 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 TK2O00142 265 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 NRDCO43847 1150 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 SERPINB2P05120 415 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
SKA2-203ENST00000578105 PLCB2Q00722 1185 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 FUT2Q10981 343 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 LAPTM4AQ15012 233 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 PPP4R3BQ5MIZ7 849 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 C12orf60Q5U649 245 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 OTUD7BQ6GQQ9 843 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 NUP133Q8WUM0 1156 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 NAP1L5Q96NT1 182 aaPredicted RBP9.48□□□□□ -0.89
SKA2-203ENST00000578105 PHF20Q9BVI0 1012 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
SKA2-203ENST00000578105 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
SKA2-203ENST00000578105 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
SKA2-203ENST00000578105 IQSEC3Q9UPP2 1182 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms