RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 USP5P45974 858 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 SIAH1Q8IUQ4 282 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 FOXP4Q8IVH2 680 aaPredicted RBP10.47□□□□□ -0.73
SMG6-210ENST00000572205 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 DYNLL2Q96FJ2 89 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 ARHGAP39Q9C0H5 1083 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
SMG6-210ENST00000572205 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 PLIN4Q96Q06 1357 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 TRIM75PA6NK02 468 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 PDHXO00330 501 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 ERC2O15083 957 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 TLR2O60603 784 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 GH2P01242 217 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 ZFYP08048 801 aaPredicted RBP10.46□□□□□ -0.73
SMG6-210ENST00000572205 TAF1CQ15572 869 aaPredicted RBP10.46□□□□□ -0.73
SMG6-210ENST00000572205 SBK1Q52WX2 424 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 CCDC129Q6ZRS4 1044 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 C16orf86Q6ZW13 317 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 ZNF589Q86UQ0 364 aaPredicted RBP10.46□□□□□ -0.73
SMG6-210ENST00000572205 CLEC10AQ8IUN9 316 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 PROCA1Q8NCQ7 364 aaPredicted RBP10.46□□□□□ -0.73
SMG6-210ENST00000572205 ZNF280CQ8ND82 737 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 AGTPBP1Q9UPW5 1226 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 SLC45A1Q9Y2W3 748 aa10.46□□□□□ -0.73
SMG6-210ENST00000572205 A0A1W2PRG0 241 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 USP17L21D6R901 530 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 HLA-DOAP06340 250 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 ASNSP08243 561 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 CYP2C8P10632 490 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 AKR1B1P15121 316 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 HMGCS2P54868 508 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 SPP2Q13103 211 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 MTMR2Q13614 643 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 KIAA1755Q5JYT7 1200 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 ZSCAN25Q6NSZ9 544 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 OTOP1Q7RTM1 612 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
SMG6-210ENST00000572205 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
SMG6-210ENST00000572205 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 ACER1Q8TDN7 264 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 ABHD8Q96I13 439 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 C12orf42Q96LP6 360 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 PICK1Q9NRD5 415 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 SLC4A4Q9Y6R1 1079 aa10.45□□□□□ -0.74
SMG6-210ENST00000572205 LRRC37A2A6NM11 1700 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 ZMYM6O95789 1325 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 IGKV6D-41A0A0C4DH26 115 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 FKTNO75072 461 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 ZMYND10O75800 440 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 RASA1P20936 1047 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 BACE1P56817 501 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 TTC6Q86TZ1 520 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 CD99L2Q8TCZ2 262 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 EMILIN3Q9NT22 766 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 ARPP21Q9UBL0 812 aaPredicted RBP10.44□□□□□ -0.74
SMG6-210ENST00000572205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMG6-210ENST00000572205 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
SMG6-210ENST00000572205 CDK8P49336 464 aa10.43□□□□□ -0.74
SMG6-210ENST00000572205 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
SMG6-210ENST00000572205 NMIQ13287 307 aaPredicted RBP10.43□□□□□ -0.74
SMG6-210ENST00000572205 SEPT2Q15019 361 aa10.43□□□□□ -0.74
SMG6-210ENST00000572205 TICAM2Q86XR7 235 aa10.43□□□□□ -0.74
SMG6-210ENST00000572205 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
SMG6-210ENST00000572205 KIAA1683Q9H0B3 1180 aa10.43□□□□□ -0.74
SMG6-210ENST00000572205 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
SMG6-210ENST00000572205 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
SMG6-210ENST00000572205 PEX10O60683 326 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
SMG6-210ENST00000572205 SP3Q02447 781 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 CERKLQ49MI3 558 aaPredicted RBP10.42□□□□□ -0.74
SMG6-210ENST00000572205 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 TXNRD2Q9NNW7 524 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 CPA4Q9UI42 421 aa10.42□□□□□ -0.74
SMG6-210ENST00000572205 ZNFX1Q9P2E3 1918 aaKnown RBP10.42□□□□□ -0.74
SMG6-210ENST00000572205 SMCHD1A6NHR9 2005 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 CNMDO75829 334 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms