RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 NEDD1Q8NHV4 660 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
BBS4-213ENST00000567279 FTOQ9C0B1 505 aaKnown RBP eCLIP13.61□□□□□ -0.23
BBS4-213ENST00000567279 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 TCP10Q12799 353 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 ANKS1AQ92625 1134 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
BBS4-213ENST00000567279 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 BCS1LQ9Y276 419 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 CD2APQ9Y5K6 639 aa13.6□□□□□ -0.23
BBS4-213ENST00000567279 PLIN4Q96Q06 1357 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 GOLGA6L3A6NEY3 463 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 VIL1P09327 827 aaKnown RBP13.59□□□□□ -0.23
BBS4-213ENST00000567279 KIF5BP33176 963 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 PTGER2P43116 358 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 FUT2Q10981 343 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 ATL3Q6DD88 541 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 TDRD3Q9H7E2 651 aaKnown RBP13.59□□□□□ -0.23
BBS4-213ENST00000567279 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
BBS4-213ENST00000567279 hCG_1642624A0A1W2PR95 340 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
BBS4-213ENST00000567279 CEP95Q96GE4 821 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 KCNJ14Q9UNX9 436 aa13.59□□□□□ -0.23
BBS4-213ENST00000567279 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.24
BBS4-213ENST00000567279 NFKBIEO00221 500 aa13.58□□□□□ -0.24
BBS4-213ENST00000567279 PRPF3O43395 683 aaKnown RBP13.58□□□□□ -0.24
BBS4-213ENST00000567279 AKR1B1P15121 316 aa13.58□□□□□ -0.24
BBS4-213ENST00000567279 GRM4Q14833 912 aa13.58□□□□□ -0.24
BBS4-213ENST00000567279 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
BBS4-213ENST00000567279 ZSCAN29Q8IWY8 852 aaPredicted RBP13.58□□□□□ -0.24
BBS4-213ENST00000567279 GMLQ99445 158 aa13.58□□□□□ -0.24
BBS4-213ENST00000567279 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
BBS4-213ENST00000567279 MMP1P03956 469 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 SHMT1P34896 483 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 PRMT6Q96LA8 375 aaPredicted RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 MAP3K14Q99558 947 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 EHD4Q9H223 541 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 DHX36Q9H2U1 1008 aaKnown RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 TMOD2Q9NZR1 351 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 V9GY48 417 aaPredicted RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 SYCE3A1L190 88 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 DDTLA6NHG4 134 aaPredicted RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 XBP1P17861 261 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 ZNF445P59923 1031 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 PKN1Q16512 942 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 DIS3L2Q8IYB7 885 aaKnown RBP13.57□□□□□ -0.24
BBS4-213ENST00000567279 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
BBS4-213ENST00000567279 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
BBS4-213ENST00000567279 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
BBS4-213ENST00000567279 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 RASSF7Q02833 373 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 CXCL9Q07325 125 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 STK38Q15208 465 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
BBS4-213ENST00000567279 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 SH3BP5LQ7L8J4 393 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 PGBD1Q96JS3 809 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
BBS4-213ENST00000567279 MAD2L2Q9UI95 211 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
BBS4-213ENST00000567279 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
BBS4-213ENST00000567279 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
BBS4-213ENST00000567279 CLRN2A0PK11 232 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 ENTPD3O75355 529 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 U2AF2P26368 475 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■■■■□ 23.8
BBS4-213ENST00000567279 GNAQP50148 359 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 EIF6P56537 245 aaKnown RBP13.55□□□□□ -0.24
BBS4-213ENST00000567279 RASGRP2Q7LDG7 609 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 GAS2L3Q86XJ1 694 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
BBS4-213ENST00000567279 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms