RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 GOLGA8AA7E2F4 631 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 FOXP2O15409 715 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 ZSCAN12O43309 604 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 SMC2O95347 1197 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 PFKFB1P16118 471 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 FGFR2P21802 821 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 MCAMP43121 646 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 HAND2P61296 217 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 GUCY1B3Q02153 619 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 LRMPQ12912 555 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 TMEM67Q5HYA8 995 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 RESP18Q5W5W9 173 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 KRT40Q6A162 431 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 MFSD6Q6ZSS7 791 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 CHST3Q7LGC8 479 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 CREBRFQ8IUR6 639 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 DNAJC10Q8IXB1 793 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 MLKLQ8NB16 471 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 IGDCC4Q8TDY8 1250 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 PIGBQ92521 554 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 DDX17Q92841 729 aaKnown RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 C16orf45Q96MC5 204 aaPredicted RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
CFDP1-202ENST00000562602 LRP6O75581 1613 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 RIC1Q4ADV7 1423 aa8.6□□□□□ -1.03
CFDP1-202ENST00000562602 XIRP1Q702N8 1843 aaKnown RBP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 TCRBV5S4A2TA0A5A2 114 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 DGAT1O75907 488 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 SLU7O95391 586 aaKnown RBP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 DEXIO95424 95 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CHGBP05060 677 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CALM1P0DP23 149 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CALM2P0DP24 149 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CALM3P0DP25 149 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CYP19A1P11511 503 aaPredicted RBP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 TUBB4BP68371 445 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CCZ1BP86790 482 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CCZ1P86791 482 aaPredicted RBP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CCDC144BQ3MJ40 725 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CCDC152Q4G0S7 254 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 AKNAD1Q5T1N1 836 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 FILIP1Q7Z7B0 1213 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 CCDC144CPQ8IYA2 1237 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 SPATA5Q8NB90 893 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 STAG1Q8WVM7 1258 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 MPHOSPH8Q99549 860 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
CFDP1-202ENST00000562602 GREM2Q9H772 168 aa8.59□□□□□ -1.03
CFDP1-202ENST00000562602 BCL9O00512 1426 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 POTECB2RU33 542 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 EXOC5O00471 708 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 IGHMBP2P38935 993 aaKnown RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 RPIAP49247 311 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 FANCCQ00597 558 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 AKAP17AQ02040 695 aaKnown RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 SCARF1Q14162 830 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 WTAPQ15007 396 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 PTPAQ15257 358 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 KRBA2Q6ZNG9 492 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 CNNM3Q8NE01 707 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF397Q8NF99 534 aaPredicted RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 HLA-CQ95604 372 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 MAP3K14Q99558 947 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 UTP14AQ9BVJ6 771 aaKnown RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 LY9Q9HBG7 655 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 BRMS1Q9HCU9 246 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 IFNKQ9P0W0 207 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 IQSEC3Q9UPP2 1182 aaPredicted RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CFDP1-202ENST00000562602 MYH15Q9Y2K3 1946 aa8.58□□□□□ -1.04
CFDP1-202ENST00000562602 PHLPP2Q6ZVD8 1323 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 LAMA4Q16363 1823 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ARHGAP6O43182 974 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 SERPINC1P01008 464 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 MMP1P03956 469 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 UBASH3AP57075 661 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 GABPB1Q06547 395 aaPredicted RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 NCBP1Q09161 790 aaKnown RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 TUBB2AQ13885 445 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 NCAPHQ15003 741 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms