RNA–Protein interactions for RNA: ENST00000560045.1

IGKV2D-40-202, Transcript of immunoglobulin kappa variable 2D-40, humanhuman

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Gene IGKV2D-40, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-40-202ENST00000560045 GNAT2P19087 354 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 VCAM1P19320 739 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 FLT3LGP49771 235 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 UBXN2AP68543 259 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 C16orf86Q6ZW13 317 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SH3TC2Q8TF17 1288 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 COA7Q96BR5 231 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 FEZ1Q99689 392 aa13.13□□□□□ -0.31
IGKV2D-40-202ENST00000560045 PRKAB2O43741 272 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 MX1P20591 662 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 LPAR1Q92633 364 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 STRBPQ96SI9 672 aaKnown RBP13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
IGKV2D-40-202ENST00000560045 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 RNF113AO15541 343 aaKnown RBP13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CHGBP05060 677 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GJB1P08034 283 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 MAPK4P31152 587 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ERVK-24P63145 666 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 EVX2Q03828 476 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GPRC5AQ8NFJ5 357 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SHISA4Q96DD7 197 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
IGKV2D-40-202ENST00000560045 PLIN4Q96Q06 1357 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 USP17L21D6R901 530 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GPAA1O43292 621 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ADCY3O60266 1144 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CYP2D6P10635 497 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GJA8P48165 433 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SEPT2Q15019 361 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 TMX2Q9Y320 296 aa13.1□□□□□ -0.31
IGKV2D-40-202ENST00000560045 A0A1W2PRG0 241 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 GSG1L2A8MUP6 293 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 XRCC5P13010 732 aaKnown RBP13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 CDK8P49336 464 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ICA1Q05084 483 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 MTFR1Q15390 333 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 EPB41L4AQ9HCS5 686 aaPredicted RBP13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
IGKV2D-40-202ENST00000560045 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 HMGCRP04035 888 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 INHAP05111 366 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 CCL5P13501 91 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 AKR1B1P15121 316 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 CCNA1P78396 465 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 USP6NLQ92738 828 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 VCPKMTQ9H867 229 aa13.08□□□□□ -0.32
IGKV2D-40-202ENST00000560045 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 M0R2C6 588 aa13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 CNMDO75829 334 aa13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 ZYXQ15942 572 aaKnown RBP13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
IGKV2D-40-202ENST00000560045 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms