RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SEPT2Q15019 361 aa14.89□□□□□ -0.03
SLIRP-209ENST00000557342 PKN2Q16513 984 aaKnown RBP14.89□□□□□ -0.03
SLIRP-209ENST00000557342 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
SLIRP-209ENST00000557342 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
SLIRP-209ENST00000557342 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 AKR1B1P15121 316 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 GUCY1A2P33402 732 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 PDE4BQ07343 736 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 PPARAQ07869 468 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 KIF22Q14807 665 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 ALX1Q15699 326 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 C17orf99Q6UX52 265 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-209ENST00000557342 KIAA1683Q9H0B3 1180 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
SLIRP-209ENST00000557342 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 CYP2C8P10632 490 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 GSPT1P15170 499 aaKnown RBP14.87□□□□□ -0.03
SLIRP-209ENST00000557342 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-209ENST00000557342 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
SLIRP-209ENST00000557342 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-209ENST00000557342 C12orf42Q96LP6 360 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 MCOLN1Q9GZU1 580 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 CPA4Q9UI42 421 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 ZMYM6O95789 1325 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
SLIRP-209ENST00000557342 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
SLIRP-209ENST00000557342 RASA1P20936 1047 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-209ENST00000557342 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-209ENST00000557342 ICA1Q05084 483 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 VPS53Q5VIR6 699 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-209ENST00000557342 STK11IPQ8N1F8 1099 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 CD99L2Q8TCZ2 262 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
SLIRP-209ENST00000557342 FOXP2O15409 715 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 BCRP11274 1271 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 LACTBP83111 547 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-209ENST00000557342 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
SLIRP-209ENST00000557342 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 ASCC2Q9H1I8 757 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-209ENST00000557342 EFCC1Q9HA90 598 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 TRIM17Q9Y577 477 aa14.85□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L15C9J2P7 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L13C9JLJ4 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L11C9JVI0 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 CAPN15O75808 1086 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 GNRH1P01148 92 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 FGAP02671 866 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 GTF3C2Q8WUA4 911 aaPredicted RBP14.84□□□□□ -0.03
SLIRP-209ENST00000557342 LPAR1Q92633 364 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 ZSWIM8A7E2V4 1837 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 RAD50Q92878 1312 aa14.84□□□□□ -0.03
SLIRP-209ENST00000557342 A0A1W2PRG0 241 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
SLIRP-209ENST00000557342 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 FBXO46Q6PJ61 603 aaPredicted RBP14.83□□□□□ -0.04
SLIRP-209ENST00000557342 OTOP1Q7RTM1 612 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 ABHD8Q96I13 439 aa14.83□□□□□ -0.04
SLIRP-209ENST00000557342 PARP14Q460N5 1801 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 PRDM1O75626 825 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
SLIRP-209ENST00000557342 VCAM1P19320 739 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 HOXD10P28358 340 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 CTDSPL2Q05D32 466 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 FAM110CQ1W6H9 321 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 DSCC1Q9BVC3 393 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■□□□□ 10.5
SLIRP-209ENST00000557342 VCPKMTQ9H867 229 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 NYAP2Q9P242 653 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
SLIRP-209ENST00000557342 PLIN4Q96Q06 1357 aa14.82□□□□□ -0.04
SLIRP-209ENST00000557342 ORC4O43929 436 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 CHMLP26374 656 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 PSMC4P43686 418 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 PRMT2P55345 433 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 FCGRTP55899 365 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 HERVK_113P62684 666 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 TFAP4Q01664 338 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms