RNA–Protein interactions for RNA: ENST00000553144.1

ATP2A2-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-212ENST00000553144 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 TBC1D31Q96DN5 1066 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 VMP1Q96GC9 406 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 HERPUD2Q9BSE4 406 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 RBM42Q9BTD8 480 aaKnown RBP5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 DHX36Q9H2U1 1008 aaKnown RBP5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 ZNF408Q9H9D4 720 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 CCDC87Q9NVE4 849 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 TMEM260Q9NX78 707 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 XPO7Q9UIA9 1087 aaKnown RBP5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 RABL2BQ9UNT1 228 aa5.35□□□□□ -1.55
ATP2A2-212ENST00000553144 ITGB4P16144 1822 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 KIF13BQ9NQT8 1826 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 NCAPD2Q15021 1401 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 KDM2BQ8NHM5 1336 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 KLRG2A4D1S0 409 aaPredicted RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 GLTPD2A6NH11 291 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 USP17L5A8MUK1 530 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 POLRMTO00411 1230 aaKnown RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 FOXN1O15353 648 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 HTATSF1O43719 755 aaKnown RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 SNX2O60749 519 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 TPPPO94811 219 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 RASGRP1O95267 797 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 NEFHP12036 1026 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 TNFAIP3P21580 790 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 PMLP29590 882 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 CNGA1P29973 690 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 RFC4P35249 363 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 DDIT3P35638 169 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 SNX16P57768 344 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 FKBP4Q02790 459 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 SLC20A2Q08357 652 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 TRIM29Q14134 588 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 CPLX2Q6PUV4 134 aaKnown RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 LVRNQ6Q4G3 990 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 DAAM2Q86T65 1068 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 DDX42Q86XP3 938 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 IQCF2Q8IXL9 164 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 OR8H2Q8N162 312 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 ZNF579Q8NAF0 562 aaKnown RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 TRPM4Q8TD43 1214 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 GTF3C2Q8WUA4 911 aaPredicted RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 JPH3Q8WXH2 748 aaPredicted RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 SPAG5Q96R06 1193 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 FAM167BQ9BTA0 163 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 PRKD2Q9BZL6 878 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 COMMD8Q9NX08 183 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 CXXC1Q9P0U4 656 aaPredicted RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 IPPQ9Y573 584 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 PARP3Q9Y6F1 533 aa5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 DNMT3AQ9Y6K1 912 aaPredicted RBP5.34□□□□□ -1.55
ATP2A2-212ENST00000553144 FLT4P35916 1363 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 TONSLQ96HA7 1378 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 CNTNAP4Q9C0A0 1308 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 TMEM110-MUSTN1A8MSY1 372 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 NFKBIEO00221 500 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 PTCD1O75127 700 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 CCDC175P0C221 793 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 IDEP14735 1019 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 VEGFAP15692 232 aaPredicted RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 HMGB2P26583 209 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 CRKLP46109 303 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 NEK3P51956 506 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 EIF4G2P78344 907 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 PURAQ00577 322 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 DDX10Q13206 875 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 TMED1Q13445 227 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 MTMR3Q13615 1198 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 DSC3Q14574 896 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 OCLNQ16625 522 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 SLC10A5Q5PT55 438 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 DACT2Q5SW24 774 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 IL31Q6EBC2 164 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 MZT2AQ6P582 158 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 INTS5Q6P9B9 1019 aaKnown RBP5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 MORC1Q86VD1 984 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 NUDT12Q9BQG2 462 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 NEUROD4Q9HD90 331 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 POLKQ9UBT6 870 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 PCDHB15Q9Y5E8 787 aa5.33□□□□□ -1.56
ATP2A2-212ENST00000553144 KDM6AO15550 1401 aaPredicted RBP5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 SMG6Q86US8 1419 aaKnown RBP5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 PLEKHG2Q9H7P9 1386 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 C4AP0C0L4 1744 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 USP42Q9H9J4 1324 aaKnown RBP5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 IQCA1LA6NCM1 817 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 ERVV-2B6SEH9 535 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 KLF4O43474 513 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 AKAP10O43572 662 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 SKIP12755 728 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 SLC5A1P13866 664 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 GLULP15104 373 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 KIF5BP33176 963 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 ADD2P35612 726 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 GJA5P36382 358 aa5.32□□□□□ -1.56
ATP2A2-212ENST00000553144 UBA7P41226 1012 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms