RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
SNX29P1-201ENST00000548357 GREB1LQ9C091 1923 aaPredicted RBP18.51■□□□□ 0.55
SNX29P1-201ENST00000548357 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 MAGEB6P1A0A0J9YX57 407 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 GOLIM4O00461 696 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 IGSF3O75054 1194 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 GABPAQ06546 454 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 RAB3GAP1Q15042 981 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 GPR142Q7Z601 462 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 SDR42E1Q8WUS8 393 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 GINM1Q9NU53 330 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 ZNF236Q9UL36 1845 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 COL6A3P12111 3177 aa18.5■□□□□ 0.55
SNX29P1-201ENST00000548357 RPTORQ8N122 1335 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 VCAM1P19320 739 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 SEPT2Q15019 361 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 ABCB5Q2M3G0 1257 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 CERKLQ49MI3 558 aaPredicted RBP18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 MORN1Q5T089 497 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 SLC9C2Q5TAH2 1124 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 CLEC10AQ8IUN9 316 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 FEZ1Q99689 392 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 BTBD7Q9P203 1132 aa18.49■□□□□ 0.55
SNX29P1-201ENST00000548357 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 PRKAB2O43741 272 aa18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 NUDT12Q9BQG2 462 aa18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 FLRT1Q9NZU1 646 aa18.48■□□□□ 0.55
SNX29P1-201ENST00000548357 LAMA2P24043 3122 aaKnown RBP18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 MYH4Q9Y623 1939 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 SOX1O00570 391 aaPredicted RBP18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 EVI5O60447 810 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 CACNB2Q08289 660 aaPredicted RBP18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 CATSPERGQ6ZRH7 1159 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 KIF1BPQ96EK5 621 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 KIAA1683Q9H0B3 1180 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 PFASO15067 1338 aa18.47■□□□□ 0.55
SNX29P1-201ENST00000548357 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 SPDYE16A6NNV3 312 aaPredicted RBP18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L15C9J2P7 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L11C9JVI0 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L18D6R9N7 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 POLR3DP05423 398 aaPredicted RBP18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 PLEKHH3Q7Z736 793 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 C7orf61Q8IZ16 206 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 SOCS4Q8WXH5 440 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 BOLA2Q9H3K6 86 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 RPAP3Q9H6T3 665 aaPredicted RBP18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 MCM9Q9NXL9 1143 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 OGDHLQ9ULD0 1010 aa18.46■□□□□ 0.55
SNX29P1-201ENST00000548357 MAPK4P31152 587 aa18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 HSP90AB4PQ58FF6 505 aa18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 CLASRPQ8N2M8 674 aaKnown RBP18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 CRNKL1Q9BZJ0 848 aaKnown RBP18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 ZMYND8Q9ULU4 1186 aaPredicted RBP18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 NR2E3Q9Y5X4 410 aa18.45■□□□□ 0.54
SNX29P1-201ENST00000548357 LTBP2Q14767 1821 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 MBD4O95243 580 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 IFIT2P09913 472 aaKnown RBP18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 TTF1Q15361 905 aaPredicted RBP18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 LHX8Q68G74 356 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 ANKLE1Q8NAG6 615 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 APBA2Q99767 749 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 DDX19BQ9UMR2 479 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
SNX29P1-201ENST00000548357 SYN1P17600 705 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 ADD2P35612 726 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 RGS2P41220 211 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 PDE3AQ14432 1141 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 C11orf49Q9H6J7 331 aa18.43■□□□□ 0.54
SNX29P1-201ENST00000548357 PAG1Q9NWQ8 432 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms