RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ZSCAN16Q9H4T2 348 aaPredicted RBP14.4□□□□□ -0.1
RAB5B-204ENST00000548068 IL17RBQ9NRM6 502 aa14.4□□□□□ -0.1
RAB5B-204ENST00000548068 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 SHMT1P34896 483 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 GNAQP50148 359 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 PRELPP51888 382 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 AKAP17AQ02040 695 aaKnown RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 TROAPQ12815 778 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 NTRK3Q16288 839 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 CSPP1Q1MSJ5 1256 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 FOXD4L5Q5VV16 416 aaPredicted RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 MICALL2Q8IY33 904 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 GPC2Q8N158 579 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 C8orf76Q96K31 380 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 CSRNP1Q96S65 589 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 FAM217BQ9NTX9 383 aaPredicted RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
RAB5B-204ENST00000548068 STX8Q9UNK0 236 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 ZNF541Q9H0D2 1346 aa14.39□□□□□ -0.11
RAB5B-204ENST00000548068 H7C1D1 291 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 WNT10BO00744 389 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 DEXIO95424 95 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 NOVP48745 357 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 TRIM29Q14134 588 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 CDC37L1Q7L3B6 337 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 ZFPM1Q8IX07 1006 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 SLC26A6Q9BXS9 759 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 RNF26Q9BY78 433 aaPredicted RBP14.38□□□□□ -0.11
RAB5B-204ENST00000548068 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
RAB5B-204ENST00000548068 MYH4Q9Y623 1939 aa14.38□□□□□ -0.11
RAB5B-204ENST00000548068 CNTNAP1P78357 1384 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 TTLL1O95922 423 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 FDPSP14324 419 aaKnown RBP14.37□□□□□ -0.11
RAB5B-204ENST00000548068 AKR1B1P15121 316 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 GRM4Q14833 912 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 SKOR2Q2VWA4 1001 aaPredicted RBP14.37□□□□□ -0.11
RAB5B-204ENST00000548068 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
RAB5B-204ENST00000548068 MCTP1Q6DN14 999 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 TATDN1Q6P1N9 297 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 SH3BP5LQ7L8J4 393 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 CEP95Q96GE4 821 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 TMEM47Q9BQJ4 181 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 MTMR4Q9NYA4 1195 aa14.37□□□□□ -0.11
RAB5B-204ENST00000548068 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
RAB5B-204ENST00000548068 XBP1P17861 261 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 KIF4BQ2VIQ3 1234 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 TMEM179Q6ZVK1 233 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 PHKBQ93100 1093 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.36□□□□□ -0.11
RAB5B-204ENST00000548068 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
RAB5B-204ENST00000548068 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
RAB5B-204ENST00000548068 TBC1D12O60347 775 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 FBXO18Q8NFZ0 1043 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 HOOK2Q96ED9 719 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 CABP5Q9NP86 173 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
RAB5B-204ENST00000548068 DTNBO60941 627 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 YBX3P16989 372 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 KRT85P78386 507 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 RESTQ13127 1097 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 RBM26Q5T8P6 1007 aaKnown RBP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 BRAPQ7Z569 592 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 APOBEC3FQ8IUX4 373 aaKnown RBP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 SYNPO2Q9UMS6 1093 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
RAB5B-204ENST00000548068 ZC3H4Q9UPT8 1303 aaKnown RBP14.34□□□□□ -0.11
RAB5B-204ENST00000548068 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 NCLP19338 710 aaKnown RBP14.33□□□□□ -0.12
RAB5B-204ENST00000548068 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 FOSBP53539 338 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 FUT2Q10981 343 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 SAFBQ15424 915 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB5B-204ENST00000548068 TBC1D10BQ4KMP7 808 aaPredicted RBP14.33□□□□□ -0.12
RAB5B-204ENST00000548068 ASPRV1Q53RT3 343 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
RAB5B-204ENST00000548068 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
RAB5B-204ENST00000548068 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
RAB5B-204ENST00000548068 TCHHQ07283 1943 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms