RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 IRF5Q13568 498 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 FAM110CQ1W6H9 321 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-205ENST00000545868 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-205ENST00000545868 PAK6Q9NQU5 681 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-205ENST00000545868 RAI14Q9P0K7 980 aa11.85□□□□□ -0.51
GABRB3-205ENST00000545868 BIN2Q9UBW5 565 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-205ENST00000545868 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
GABRB3-205ENST00000545868 PEX10O60683 326 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 SGPL1O95470 568 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 GNAI2P04899 355 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 CAP2P40123 477 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 HMGCS2P54868 508 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 UBXN2AP68543 259 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 C6orf132Q5T0Z8 1188 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 DPF3Q92784 378 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 DBNDD2Q9BQY9 259 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 PLXNA1Q9UIW2 1896 aa11.84□□□□□ -0.51
GABRB3-205ENST00000545868 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 LDHCP07864 332 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 GSTO1P78417 241 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 ZNF280CQ8ND82 737 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 DIS3LQ8TF46 1054 aaKnown RBP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
GABRB3-205ENST00000545868 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 AATFQ9NY61 560 aaKnown RBP eCLIP11.83□□□□□ -0.52
GABRB3-205ENST00000545868 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-205ENST00000545868 TRIM32Q13049 653 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 G3BP1Q13283 466 aaKnown RBP eCLIP11.82□□□□□ -0.52
GABRB3-205ENST00000545868 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
GABRB3-205ENST00000545868 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 C1orf115Q9H7X2 142 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
GABRB3-205ENST00000545868 GJD2Q9UKL4 321 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 FLT1P17948 1338 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
GABRB3-205ENST00000545868 EYSQ5T1H1 3165 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 UQCRFS1P1P0C7P4 283 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 RLBP1P12271 317 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 PPP4CP60510 307 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 MTMR2Q13614 643 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 NAA16Q6N069 864 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-205ENST00000545868 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 HTATIP2Q9BUP3 242 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 PIH1D3Q9NQM4 214 aaKnown RBP11.81□□□□□ -0.52
GABRB3-205ENST00000545868 LRP2BPQ9P2M1 347 aa11.81□□□□□ -0.52
GABRB3-205ENST00000545868 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
GABRB3-205ENST00000545868 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
GABRB3-205ENST00000545868 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
GABRB3-205ENST00000545868 GDF11O95390 407 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 ZAP70P43403 619 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 DYNLL1P63167 89 aaKnown RBP11.8□□□□□ -0.52
GABRB3-205ENST00000545868 TTC39AQ5SRH9 613 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 COA7Q96BR5 231 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 WDR18Q9BV38 432 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 TBC1D2Q9BYX2 928 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.8□□□□□ -0.52
GABRB3-205ENST00000545868 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 PI4KBQ9UBF8 816 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 ZNF236Q9UL36 1845 aa11.8□□□□□ -0.52
GABRB3-205ENST00000545868 SOX1O00570 391 aaPredicted RBP11.79□□□□□ -0.52
GABRB3-205ENST00000545868 SNPHO15079 494 aa11.79□□□□□ -0.52
GABRB3-205ENST00000545868 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
GABRB3-205ENST00000545868 HMGCRP04035 888 aa11.79□□□□□ -0.52
GABRB3-205ENST00000545868 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
GABRB3-205ENST00000545868 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
GABRB3-205ENST00000545868 TRIB2Q92519 343 aa11.79□□□□□ -0.52
GABRB3-205ENST00000545868 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
GABRB3-205ENST00000545868 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
GABRB3-205ENST00000545868 MYH4Q9Y623 1939 aa11.79□□□□□ -0.52
GABRB3-205ENST00000545868 GREB1LQ9C091 1923 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 MCM3APO60318 1980 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 ASNSP08243 561 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms