RNA–Protein interactions for RNA: ENST00000545174.5

NEK6-214, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 2,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-214ENST00000545174 MED15Q96RN5 788 aa25.24■■□□□ 1.63
NEK6-214ENST00000545174 SCN7AQ01118 1682 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 ACTN4O43707 911 aaKnown RBP25.23■■□□□ 1.63
NEK6-214ENST00000545174 TMTC3Q6ZXV5 915 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 EP400Q96L91 3159 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 SFPQP23246 707 aaKnown RBP eCLIP25.23■■□□□ 1.632e-6■■■■□ 19.3
NEK6-214ENST00000545174 KRT2P35908 639 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 VPS72Q15906 364 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 CRNKL1Q9BZJ0 848 aaKnown RBP25.23■■□□□ 1.63
NEK6-214ENST00000545174 INTS13Q9NVM9 706 aa25.23■■□□□ 1.63
NEK6-214ENST00000545174 TRIM75PA6NK02 468 aa25.22■■□□□ 1.63
NEK6-214ENST00000545174 NPHP1O15259 732 aa25.22■■□□□ 1.63
NEK6-214ENST00000545174 DHX58Q96C10 678 aa25.22■■□□□ 1.63
NEK6-214ENST00000545174 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
NEK6-214ENST00000545174 SEMA3EO15041 775 aa25.22■■□□□ 1.63
NEK6-214ENST00000545174 MCM9Q9NXL9 1143 aa25.22■■□□□ 1.63
NEK6-214ENST00000545174 SARSP49591 514 aaKnown RBP25.21■■□□□ 1.63
NEK6-214ENST00000545174 NFIXQ14938 502 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 CNTNAP5Q8WYK1 1306 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 AFMP43652 599 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 RC3H1Q5TC82 1133 aaKnown RBP25.21■■□□□ 1.63
NEK6-214ENST00000545174 ZNF579Q8NAF0 562 aaKnown RBP25.21■■□□□ 1.63
NEK6-214ENST00000545174 CCDC112Q8NEF3 446 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 DYNLL2Q96FJ2 89 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 ANKRD2Q9GZV1 360 aa25.21■■□□□ 1.63
NEK6-214ENST00000545174 PPP2R5BQ15173 497 aa25.2■■□□□ 1.63
NEK6-214ENST00000545174 UBE2Q2Q8WVN8 375 aa25.2■■□□□ 1.63
NEK6-214ENST00000545174 XBP1P17861 261 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 NCBP1Q09161 790 aaKnown RBP25.2■■□□□ 1.62
NEK6-214ENST00000545174 DIXDC1Q155Q3 683 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 RCSD1Q6JBY9 416 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 TNFRSF25Q93038 417 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 SMARCE1Q969G3 411 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 PAXBP1Q9Y5B6 917 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 IRS2Q9Y4H2 1338 aa25.2■■□□□ 1.62
NEK6-214ENST00000545174 TSPY2A6NKD2 308 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 ORC4O43929 436 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 RBM28Q9NW13 759 aaKnown RBP25.19■■□□□ 1.62
NEK6-214ENST00000545174 ANKIB1Q9P2G1 1089 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 MORC3Q14149 939 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 CCDC150Q8NCX0 1101 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 STAMQ92783 540 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 SYMPKQ92797 1274 aaKnown RBP25.19■■□□□ 1.62
NEK6-214ENST00000545174 CEP131Q9UPN4 1083 aa25.19■■□□□ 1.62
NEK6-214ENST00000545174 NT5DC1Q5TFE4 455 aa25.18■■□□□ 1.62
NEK6-214ENST00000545174 DZIP1Q86YF9 867 aaKnown RBP25.18■■□□□ 1.62
NEK6-214ENST00000545174 NFE2L3Q9Y4A8 694 aa25.18■■□□□ 1.62
NEK6-214ENST00000545174 CTCFLQ8NI51 663 aaPredicted RBP25.18■■□□□ 1.62
NEK6-214ENST00000545174 PPP1R13BQ96KQ4 1090 aa25.18■■□□□ 1.62
NEK6-214ENST00000545174 SAMSN1Q9NSI8 373 aaKnown RBP25.18■■□□□ 1.62
NEK6-214ENST00000545174 ATP8A2Q9NTI2 1148 aa25.18■■□□□ 1.62
NEK6-214ENST00000545174 DDAH1O94760 285 aa25.17■■□□□ 1.62
NEK6-214ENST00000545174 MTERF4Q7Z6M4 381 aaKnown RBP25.17■■□□□ 1.62
NEK6-214ENST00000545174 ANKRD7Q92527 254 aa25.17■■□□□ 1.62
NEK6-214ENST00000545174 SH3RF3Q8TEJ3 882 aaPredicted RBP25.17■■□□□ 1.62
NEK6-214ENST00000545174 IL17RBQ9NRM6 502 aa25.17■■□□□ 1.62
NEK6-214ENST00000545174 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.17■■□□□ 1.62
NEK6-214ENST00000545174 MTMR7Q9Y216 660 aa25.17■■□□□ 1.62
NEK6-214ENST00000545174 V9GYY5 206 aaPredicted RBP25.17■■□□□ 1.62
NEK6-214ENST00000545174 TOM1O60784 492 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 CALM1P0DP23 149 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 CALM2P0DP24 149 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 CALM3P0DP25 149 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 PIK3AP1Q6ZUJ8 805 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 VSTM4Q8IW00 320 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 ELOA2Q8IYF1 753 aaPredicted RBP25.16■■□□□ 1.62
NEK6-214ENST00000545174 HOOK1Q9UJC3 728 aaKnown RBP25.16■■□□□ 1.62
NEK6-214ENST00000545174 VWA3AA6NCI4 1184 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 TFAP4Q01664 338 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 PTGDRQ13258 359 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 STAG2Q8N3U4 1231 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 SLC44A5Q8NCS7 719 aa25.16■■□□□ 1.62
NEK6-214ENST00000545174 PCP11498 1178 aaKnown RBP25.15■■□□□ 1.62
NEK6-214ENST00000545174 SMYD4Q8IYR2 804 aaPredicted RBP25.15■■□□□ 1.62
NEK6-214ENST00000545174 PPP4R3BQ5MIZ7 849 aa25.15■■□□□ 1.62
NEK6-214ENST00000545174 TTC38Q5R3I4 469 aa25.15■■□□□ 1.62
NEK6-214ENST00000545174 ARPP21Q9UBL0 812 aaPredicted RBP25.15■■□□□ 1.62
NEK6-214ENST00000545174 USP17L3A6NCW0 530 aa25.14■■□□□ 1.62
NEK6-214ENST00000545174 USP17L4A6NCW7 530 aa25.14■■□□□ 1.62
NEK6-214ENST00000545174 RFC4P35249 363 aa25.14■■□□□ 1.62
NEK6-214ENST00000545174 NLRP5P59047 1200 aa25.14■■□□□ 1.62
NEK6-214ENST00000545174 USP17L1Q7RTZ2 530 aa25.14■■□□□ 1.62
NEK6-214ENST00000545174 GPKOWQ92917 476 aaPredicted RBP eCLIP25.14■■□□□ 1.62
NEK6-214ENST00000545174 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
NEK6-214ENST00000545174 COBLO75128 1261 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 SCG2P13521 617 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 CD44P16070 742 aaKnown RBP25.14■■□□□ 1.61
NEK6-214ENST00000545174 SBK1Q52WX2 424 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 PDCL2Q8N4E4 241 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 SPATA20Q8TB22 786 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 PAGE5Q96GU1 130 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 KCND1Q9NSA2 647 aa25.14■■□□□ 1.61
NEK6-214ENST00000545174 ZNF215Q9UL58 517 aaPredicted RBP25.14■■□□□ 1.61
NEK6-214ENST00000545174 TOP1P11387 765 aaKnown RBP25.13■■□□□ 1.61
NEK6-214ENST00000545174 ZNF18P17022 549 aa25.13■■□□□ 1.61
NEK6-214ENST00000545174 STX17P56962 302 aa25.13■■□□□ 1.61
NEK6-214ENST00000545174 IL17AQ16552 155 aa25.13■■□□□ 1.61
NEK6-214ENST00000545174 KLHL10Q6JEL2 608 aa25.13■■□□□ 1.61
NEK6-214ENST00000545174 FAM196AQ6ZSG2 479 aa25.13■■□□□ 1.61
NEK6-214ENST00000545174 MLKLQ8NB16 471 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms