RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SERPINB2P05120 415 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 MMP10P09238 476 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 TPM4P67936 248 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 GRIN1Q05586 938 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 PDE4BQ07343 736 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 ISM2Q6H9L7 571 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 ILDR2Q71H61 639 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 LRRC8AQ8IWT6 810 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 ELOA2Q8IYF1 753 aaPredicted RBP15.97■□□□□ 0.15
MSH2-206ENST00000543555 WDR66Q8TBY9 1149 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 XDHP47989 1333 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 IKBKBO14920 756 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 NEMFO60524 1076 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 NMT2O60551 498 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 KRT2P35908 639 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
MSH2-206ENST00000543555 MYRIPQ8NFW9 859 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 TNS1Q9HBL0 1735 aaKnown RBP15.97■□□□□ 0.15
MSH2-206ENST00000543555 LDHBP07195 334 aaKnown RBP15.97■□□□□ 0.15
MSH2-206ENST00000543555 SRPRBQ9Y5M8 271 aaKnown RBP15.97■□□□□ 0.15
MSH2-206ENST00000543555 MYH6P13533 1939 aa15.97■□□□□ 0.15
MSH2-206ENST00000543555 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 ADRA2BP18089 450 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 FILIP1Q7Z7B0 1213 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
MSH2-206ENST00000543555 MCM9Q9NXL9 1143 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 CNTNAP5Q8WYK1 1306 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 ZBTB7AO95365 584 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
MSH2-206ENST00000543555 MORC2Q9Y6X9 1032 aaPredicted RBP15.96■□□□□ 0.15
MSH2-206ENST00000543555 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 FOXP4Q8IVH2 680 aaPredicted RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 FAM205CA6NFA0 338 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 SRBD1Q8N5C6 995 aaKnown RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 IFNKQ9P0W0 207 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 HOOK1Q9UJC3 728 aaKnown RBP15.95■□□□□ 0.14
MSH2-206ENST00000543555 PCDHA5Q9Y5H7 936 aa15.95■□□□□ 0.14
MSH2-206ENST00000543555 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 R3HDM1Q15032 1099 aaKnown RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 EARS2Q5JPH6 523 aaKnown RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 C12orf60Q5U649 245 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 C15orf52Q6ZUT6 534 aaKnown RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 UPF1Q92900 1129 aaKnown RBP eCLIP15.94■□□□□ 0.14
MSH2-206ENST00000543555 SMC2O95347 1197 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 USP5P45974 858 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 RPGRQ92834 1020 aaKnown RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 IMPACTQ9P2X3 320 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 FOXN1O15353 648 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 POLR2DO15514 142 aaKnown RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 GSTO1P78417 241 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 NPY5RQ15761 445 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 RCSD1Q6JBY9 416 aa15.94■□□□□ 0.14
MSH2-206ENST00000543555 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
MSH2-206ENST00000543555 NT5C2P49902 561 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 GSDMDP57764 484 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 MYL5Q02045 173 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 GRIK5Q16478 980 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 SH3RF3Q8TEJ3 882 aaPredicted RBP15.93■□□□□ 0.14
MSH2-206ENST00000543555 TNFRSF25Q93038 417 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 GPR101Q96P66 508 aaPredicted RBP15.93■□□□□ 0.14
MSH2-206ENST00000543555 CSRNP2Q9H175 543 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 SERTAD1Q9UHV2 236 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 POLRMTO00411 1230 aaKnown RBP15.93■□□□□ 0.14
MSH2-206ENST00000543555 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
MSH2-206ENST00000543555 POSTNQ15063 836 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 DIXDC1Q155Q3 683 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
MSH2-206ENST00000543555 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
MSH2-206ENST00000543555 PPP4CP60510 307 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 GPSM2P81274 684 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 CCZ1BP86790 482 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
MSH2-206ENST00000543555 CRY2Q49AN0 593 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
MSH2-206ENST00000543555 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
MSH2-206ENST00000543555 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 RRP9O43818 475 aaKnown RBP15.92■□□□□ 0.14
MSH2-206ENST00000543555 BAG3O95817 575 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 SKILP12757 684 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 GTF2F1P35269 517 aaKnown RBP eCLIP15.92■□□□□ 0.14
MSH2-206ENST00000543555 FANCCQ00597 558 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 TFAP4Q01664 338 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 SCG2P13521 617 aa15.92■□□□□ 0.14
MSH2-206ENST00000543555 KIF5BP33176 963 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms