RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 A0A087X0B3 334 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 DDAH1O94760 285 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 SKILP12757 684 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 KRT2P35908 639 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 RIOK3O14730 519 aaKnown RBP15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 GJD4Q96KN9 370 aaPredicted RBP15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 SRPRBQ9Y5M8 271 aaKnown RBP15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 UBR3Q6ZT12 1888 aa15.7■□□□□ 0.1
SLC3A2-220ENST00000542922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 TSPY2A6NKD2 308 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 PCP11498 1178 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 GPSM2P81274 684 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 FANCCQ00597 558 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 SBK1Q52WX2 424 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 HSP90AA4PQ58FG1 418 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 SLC44A5Q8NCS7 719 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 MAN1B1Q9UKM7 699 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 CDK5RAP2Q96SN8 1893 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 IKBKBO14920 756 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 POSTNQ15063 836 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
SLC3A2-220ENST00000542922 TRIM75PA6NK02 468 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 MYL5Q02045 173 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 ZNF174Q15697 407 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 CTCFLQ8NI51 663 aaPredicted RBP15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 OSBPL5Q9H0X9 879 aaPredicted RBP15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 XDHP47989 1333 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 CALM1P0DP23 149 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 CALM2P0DP24 149 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 CALM3P0DP25 149 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 CASP1P29466 404 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 USP5P45974 858 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 TFAP4Q01664 338 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 FMR1Q06787 632 aaKnown RBP eCLIP15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 ZNF710Q8N1W2 664 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 SAP30BPQ9UHR5 308 aaKnown RBP15.68■□□□□ 0.1
SLC3A2-220ENST00000542922 AFF2P51816 1311 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 USP17L3A6NCW0 530 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 USP17L4A6NCW7 530 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 TNNT1P13805 278 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 XBP1P17861 261 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 USP17L1Q7RTZ2 530 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 STAG2Q8N3U4 1231 aa15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
SLC3A2-220ENST00000542922 SPATA31A6Q5VVP1 1343 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 TMEM232C9JQI7 657 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 MEX3CQ5U5Q3 659 aaKnown RBP15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 SPTY2D1Q68D10 685 aaPredicted RBP15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 TRMT44Q8IYL2 757 aaKnown RBP15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 SEPT12Q8IYM1 358 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 TGFBRAP1Q8WUH2 860 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 DHX58Q96C10 678 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 MTMR7Q9Y216 660 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 SCG2P13521 617 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 GYS1P13807 737 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 PLCD1P51178 756 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 TPM4P67936 248 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 WDR66Q8TBY9 1149 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 GPKOWQ92917 476 aaPredicted RBP eCLIP15.66■□□□□ 0.14e-8■■□□□ 11.6
SLC3A2-220ENST00000542922 MED15Q96RN5 788 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 CEP131Q9UPN4 1083 aa15.66■□□□□ 0.1
SLC3A2-220ENST00000542922 NEMFO60524 1076 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 UFL1O94874 794 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 SARSP49591 514 aaKnown RBP15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 GOLGA8FQ08AF8 430 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 GOLGA8DPQ0D2H9 430 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 OLFM4Q6UX06 510 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 PIK3AP1Q6ZUJ8 805 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 INTS13Q9NVM9 706 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 ARID3AQ99856 593 aa15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
SLC3A2-220ENST00000542922 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
SLC3A2-220ENST00000542922 AFMP43652 599 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms