RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 CYP2D6P10635 497 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 IDEP14735 1019 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 DPF2Q92785 391 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 MYO5AQ9Y4I1 1855 aaKnown RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 KLRK1P26718 216 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 UBA7P41226 1012 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 DACH1Q9UI36 760 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
SLC12A4-204ENST00000541864 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 POSTNQ15063 836 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 PRDX5P30044 214 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 KRT2P35908 639 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 NCAPHQ15003 741 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 ATRNO75882 1429 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 RPS8P62241 208 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 TFAP4Q01664 338 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 EVX2Q03828 476 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 TBC1D9BQ66K14 1250 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 DYNLL2Q96FJ2 89 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 IMPACTQ9P2X3 320 aa13.14□□□□□ -0.31
SLC12A4-204ENST00000541864 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 ITGB4P16144 1822 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 CASQ1P31415 396 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
SLC12A4-204ENST00000541864 NUP98P52948 1817 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 BPIFA3Q9BQP9 254 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 PTF1AQ7RTS3 328 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 LRP6O75581 1613 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 IKBKBO14920 756 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 PTPREP23469 700 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 STAT6P42226 847 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms