RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GNL3LQ9NVN8 582 aaKnown RBP17.12■□□□□ 0.33
VARS2-211ENST00000541562 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
VARS2-211ENST00000541562 RIMBP2O15034 1052 aa17.12■□□□□ 0.33
VARS2-211ENST00000541562 DNA2P51530 1060 aa17.12■□□□□ 0.33
VARS2-211ENST00000541562 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
VARS2-211ENST00000541562 CUL4BQ13620 913 aa17.12■□□□□ 0.33
VARS2-211ENST00000541562 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
VARS2-211ENST00000541562 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
VARS2-211ENST00000541562 CNNM2Q9H8M5 875 aa17.12■□□□□ 0.33
VARS2-211ENST00000541562 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 KRT2P35908 639 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 NFIXQ14938 502 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
VARS2-211ENST00000541562 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 ANKRD7Q92527 254 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 UBA5Q9GZZ9 404 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 CAVIN2O95810 425 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 RBL2Q08999 1139 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 HPSEQ9Y251 543 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
VARS2-211ENST00000541562 CTIFO43310 598 aaKnown RBP17.1■□□□□ 0.33
VARS2-211ENST00000541562 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
VARS2-211ENST00000541562 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 PKN1Q16512 942 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 INF2Q27J81 1249 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 CDC25BP30305 580 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 CASP14P31944 242 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 SGMS1Q86VZ5 419 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
VARS2-211ENST00000541562 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 ZPR1O75312 459 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 PTPREP23469 700 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 LIFRP42702 1097 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
VARS2-211ENST00000541562 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 BCL9O00512 1426 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 N4BP3O15049 544 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 PPP6R2O75170 966 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 RHOXF2BP0C7M4 288 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
VARS2-211ENST00000541562 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 RHOXF2Q9BQY4 288 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
VARS2-211ENST00000541562 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
VARS2-211ENST00000541562 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
VARS2-211ENST00000541562 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
VARS2-211ENST00000541562 RAD51AP2Q09MP3 1159 aa17.08■□□□□ 0.33
VARS2-211ENST00000541562 PAGE5Q96GU1 130 aa17.08■□□□□ 0.33
VARS2-211ENST00000541562 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.33
VARS2-211ENST00000541562 COL18A1P39060 1754 aa17.08■□□□□ 0.33
VARS2-211ENST00000541562 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
VARS2-211ENST00000541562 ENC1O14682 589 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 XBP1P17861 261 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 WASF1Q92558 559 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 NLRP3Q96P20 1036 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■■□□□ 13.1
VARS2-211ENST00000541562 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 PHACTR2O75167 634 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 CASQ1P31415 396 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
VARS2-211ENST00000541562 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.32
VARS2-211ENST00000541562 CLCN6P51797 869 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 ETF1P62495 437 aaKnown RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 PSMB7Q99436 277 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 FRMPD2Q68DX3 1309 aaPredicted RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 ZBTB22O15209 634 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 LETM2Q2VYF4 491 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 USP17L2Q6R6M4 530 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 SUGCTQ9HAC7 445 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
VARS2-211ENST00000541562 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 NEMFO60524 1076 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 PLCD1P51178 756 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 JAKMIP3Q5VZ66 844 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
VARS2-211ENST00000541562 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
VARS2-211ENST00000541562 FAM205AQ6ZU69 1335 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 ACTN4O43707 911 aaKnown RBP17.06■□□□□ 0.32
VARS2-211ENST00000541562 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 TRMT1LQ7Z2T5 733 aaKnown RBP17.06■□□□□ 0.32
VARS2-211ENST00000541562 CAPZA3Q96KX2 299 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms