RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 RTEL1Q9NZ71 1219 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 NEDD4P46934 1319 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 COL4A1P02462 1669 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 IFIT3O14879 490 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 NPHP1O15259 732 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 GRAPQ13588 217 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 NFXL1Q6ZNB6 911 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 C15orf52Q6ZUT6 534 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 ESR2Q92731 530 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 RIOK1Q9BRS2 568 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 ABCF2Q9UG63 623 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 UBR3Q6ZT12 1888 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 COL1A1P02452 1464 aaPredicted RBP11.78□□□□□ -0.52
LMO3-224ENST00000540848 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 PPARAQ07869 468 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 TRIM29Q14134 588 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 FAM173BQ6P4H8 233 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 CCDC73Q6ZRK6 1079 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 ZSWIM5Q9P217 1185 aa11.78□□□□□ -0.52
LMO3-224ENST00000540848 HOXA2O43364 376 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 SLC3A2P08195 630 aaKnown RBP11.77□□□□□ -0.53
LMO3-224ENST00000540848 FGRP09769 529 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 IFNAR1P17181 557 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 TM4SF1P30408 202 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 IARSP41252 1262 aaKnown RBP11.77□□□□□ -0.53
LMO3-224ENST00000540848 KCNQ4P56696 695 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 WTAPQ15007 396 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 TMC4Q7Z404 712 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 WDR66Q8TBY9 1149 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 PGBD1Q96JS3 809 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
LMO3-224ENST00000540848 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 XDHP47989 1333 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 TAF1P21675 1872 aa11.77□□□□□ -0.53
LMO3-224ENST00000540848 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
LMO3-224ENST00000540848 DGAT1O75907 488 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 LIG1P18858 919 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 MMP16P51512 607 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 GSTO1P78417 241 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 ST5P78524 1137 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 SSRP1Q08945 709 aaKnown RBP11.76□□□□□ -0.53
LMO3-224ENST00000540848 FOXC1Q12948 553 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 NFIXQ14938 502 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 TRIM22Q8IYM9 498 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
LMO3-224ENST00000540848 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 UBAC1Q9BSL1 405 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 ALG1Q9BT22 464 aa11.76□□□□□ -0.53
LMO3-224ENST00000540848 IRS2Q9Y4H2 1338 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 PRKAB2O43741 272 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 CALM1P0DP23 149 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 CALM2P0DP24 149 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 CALM3P0DP25 149 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 HSPA1LP34931 641 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 NTRK3Q16288 839 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 Q3C1V9 767 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 PKDCCQ504Y2 493 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 SASS6Q6UVJ0 657 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 ZNF804AQ7Z570 1209 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 MICU3Q86XE3 530 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 RNF214Q8ND24 703 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 ARPP21Q9UBL0 812 aaPredicted RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 LAMB1P07942 1786 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 ORC4O43929 436 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 DTNBO60941 627 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 ZMYND10O75800 440 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms