RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CASP7P55210 303 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 CYP27A1Q02318 531 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 DOC2BQ14184 412 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 SLC9A7Q96T83 725 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAV11-201ENST00000539512 PHAXQ9H814 394 aaKnown RBP10.07□□□□□ -0.8
TRAV11-201ENST00000539512 MSTNO14793 375 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 GSC2O15499 205 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 CLEC3AO75596 197 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 GSK3AP49840 483 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 CYP27C1Q4G0S4 372 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 UNC5AQ6ZN44 842 aa10.06□□□□□ -0.8
TRAV11-201ENST00000539512 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
TRAV11-201ENST00000539512 A0A1W2PQH9 124 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 RNF4P78317 190 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 RAB33AQ14088 237 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 GPAT2Q6NUI2 795 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 SEZ6L2Q6UXD5 910 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 ARHGAP27Q6ZUM4 889 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 C1GALT1Q9NS00 363 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 CEP131Q9UPN4 1083 aa10.05□□□□□ -0.8
TRAV11-201ENST00000539512 DDAH1O94760 285 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 SLITRK5O94991 958 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 ZAR1Q86SH2 424 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 SLC6A18Q96N87 628 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 DUSP23Q9BVJ7 150 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
TRAV11-201ENST00000539512 ATG3Q9NT62 314 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
TRAV11-201ENST00000539512 H2AFB1P0C5Y9 115 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 H2AFB2P0C5Z0 115 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 ACRP10323 421 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 GNPTABQ3T906 1256 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 CDH24Q86UP0 819 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 PSMG3-AS1Q96PY0 264 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 OSBPL2Q9H1P3 480 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 TNKS2Q9H2K2 1166 aa10.03□□□□□ -0.8
TRAV11-201ENST00000539512 KLF4O43474 513 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 NFIAQ12857 509 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 ZYXQ15942 572 aaKnown RBP10.02□□□□□ -0.81
TRAV11-201ENST00000539512 OGFOD3Q6PK18 319 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 VHLLQ6RSH7 139 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 DPH6Q7L8W6 267 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 SPOCK3Q9BQ16 436 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
TRAV11-201ENST00000539512 OSBPL1AQ9BXW6 950 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 MKRN2Q9H000 416 aaKnown RBP10.02□□□□□ -0.81
TRAV11-201ENST00000539512 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 ST7Q9NRC1 585 aa10.02□□□□□ -0.81
TRAV11-201ENST00000539512 CCDC85CA6NKD9 419 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 UBOX5O94941 541 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 NCAPHQ15003 741 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 DDR2Q16832 855 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 COX4I2Q96KJ9 171 aa10.01□□□□□ -0.81
TRAV11-201ENST00000539512 SUCOQ9UBS9 1254 aaKnown RBP10.01□□□□□ -0.81
TRAV11-201ENST00000539512 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 LEFTY1O75610 366 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 IGHA1P01876 353 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 FSTP19883 344 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 PMS1P54277 932 aaKnown RBP10□□□□□ -0.81
TRAV11-201ENST00000539512 SFRP5Q5T4F7 317 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 CCDC144CPQ8IYA2 1237 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 DNAJB8Q8NHS0 232 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 SMARCC1Q92922 1105 aaPredicted RBP10□□□□□ -0.81
TRAV11-201ENST00000539512 KREMEN1Q96MU8 473 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 ASPNQ9BXN1 380 aa10□□□□□ -0.81
TRAV11-201ENST00000539512 IGLV1-40P01703 118 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 ITGB2P05107 769 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 NAT2P11245 290 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 ADMP35318 185 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 C6orf15Q6UXA7 325 aaPredicted RBP9.99□□□□□ -0.81
TRAV11-201ENST00000539512 FAM178BQ8IXR5 827 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 RIN3Q8TB24 985 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 RNF141Q8WVD5 230 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 MRFAP1L1Q96HT8 127 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 SRPK1Q96SB4 655 aaKnown RBP9.99□□□□□ -0.81
TRAV11-201ENST00000539512 FAM86C1Q9NVL1 165 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 ZNF214Q9UL59 606 aaPredicted RBP9.99□□□□□ -0.81
TRAV11-201ENST00000539512 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 MAPK8IP1Q9UQF2 711 aa9.99□□□□□ -0.81
TRAV11-201ENST00000539512 FAM170BA6NMN3 283 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 WDR64B1ANS9 1081 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
TRAV11-201ENST00000539512 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 ZNF765Q7L2R6 523 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 TMEM192Q8IY95 271 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 PPP1R13LQ8WUF5 828 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 ZNF512BQ96KM6 892 aaPredicted RBP9.98□□□□□ -0.81
TRAV11-201ENST00000539512 PCDHB10Q9UN67 800 aa9.98□□□□□ -0.81
TRAV11-201ENST00000539512 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms