RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
UBE3B-208ENST00000538070 SLIT2O94813 1529 aa9.95□□□□□ -0.82
UBE3B-208ENST00000538070 PPP6R2O75170 966 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 SF3B3Q15393 1217 aaKnown RBP9.94□□□□□ -0.82
UBE3B-208ENST00000538070 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 WDR19Q8NEZ3 1342 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 FMR1Q06787 632 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBE3B-208ENST00000538070 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 ARMCX5Q6P1M9 558 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 MAN1B1Q9UKM7 699 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 CEP131Q9UPN4 1083 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 CCT6AP40227 531 aaKnown RBP9.94□□□□□ -0.82
UBE3B-208ENST00000538070 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 ITGB4P16144 1822 aa9.94□□□□□ -0.82
UBE3B-208ENST00000538070 ERCC3P19447 782 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 RBM6P78332 1123 aaKnown RBP9.93□□□□□ -0.82
UBE3B-208ENST00000538070 SEC23AQ15436 765 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 TICAM2Q86XR7 235 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 DNAI1Q9UI46 699 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 FBXO2Q9UK22 296 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-208ENST00000538070 NUP98P52948 1817 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 BMP6P22004 513 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 FBXO33Q7Z6M2 555 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 CLEC10AQ8IUN9 316 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 SHISA4Q96DD7 197 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 DESI2Q9BSY9 194 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 PLEKHG2Q9H7P9 1386 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 ABCC6O95255 1503 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 CCDC194A0A1B0GVG4 234 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 PP2D1A8MPX8 630 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 PTPREP23469 700 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 PLCD1P51178 756 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 CCZ1BP86790 482 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 CCZ1P86791 482 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-208ENST00000538070 NCAPHQ15003 741 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 FOXP1Q9H334 677 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-208ENST00000538070 ZSWIM4Q9H7M6 989 aa9.93□□□□□ -0.82
UBE3B-208ENST00000538070 NWD2Q9ULI1 1742 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 GSDMDP57764 484 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 TROAPQ12815 778 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 KARSQ15046 597 aaKnown RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 PKN1Q16512 942 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 SARM1Q6SZW1 724 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 TEX11Q8IYF3 940 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 MXD3Q9BW11 206 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 UBR2Q8IWV8 1755 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 AKAP11Q9UKA4 1901 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 A0A087X0B3 334 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 MPHOSPH10O00566 681 aaKnown RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 URI1O94763 535 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 TRIM37O94972 964 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 SCNN1DP51172 638 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 INF2Q27J81 1249 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 RNF26Q9BY78 433 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 ZNF215Q9UL58 517 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 MYH14Q7Z406 1995 aaKnown RBP9.92□□□□□ -0.82
UBE3B-208ENST00000538070 GTF2IP78347 998 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 DOK7Q18PE1 504 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 MFSD14BQ5SR56 506 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 MSL1Q68DK7 614 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 KIF18AQ8NI77 898 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 PKNOX2Q96KN3 472 aa9.92□□□□□ -0.82
UBE3B-208ENST00000538070 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-208ENST00000538070 ROBO1Q9Y6N7 1651 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 BAG3O95817 575 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 SCG2P13521 617 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 BTDP43251 543 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 CTNND2Q9UQB3 1225 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 HPSEQ9Y251 543 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 FRMPD2Q68DX3 1309 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-208ENST00000538070 LRP6O75581 1613 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 CBFA2T2O43439 604 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 TERF1P54274 439 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 GPSM2P81274 684 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 VPS16Q9H269 839 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 RBM5P52756 815 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBE3B-208ENST00000538070 LETM2Q2VYF4 491 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-208ENST00000538070 ZNF804AQ7Z570 1209 aa9.91□□□□□ -0.82
UBE3B-208ENST00000538070 SRPRBQ9Y5M8 271 aaKnown RBP9.91□□□□□ -0.82
UBE3B-208ENST00000538070 SHANK3Q9BYB0 1731 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 COL4A1P02462 1669 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 CDC25BP30305 580 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 KIF5BP33176 963 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 TEX33O43247 280 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms