RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 SMARCE1Q969G3 411 aa9.87□□□□□ -0.83
CTNND1-215ENST00000526938 XPO4Q9C0E2 1151 aaKnown RBP9.87□□□□□ -0.83
CTNND1-215ENST00000526938 KCNF1Q9H3M0 494 aa9.87□□□□□ -0.83
CTNND1-215ENST00000526938 SLIT2O94813 1529 aa9.87□□□□□ -0.83
CTNND1-215ENST00000526938 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 SMTNL1A8MU46 457 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 MARCH6O60337 910 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 CALM1P0DP23 149 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 CALM2P0DP24 149 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 CALM3P0DP25 149 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 TOB1P50616 345 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 IQCB1Q15051 598 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 SEC23AQ15436 765 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 RNF26Q9BY78 433 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 MAPK8IP1Q9UQF2 711 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.831e-10■■□□□ 14
CTNND1-215ENST00000526938 UBASH3AP57075 661 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 NLRP12P59046 1061 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 TROAPQ12815 778 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 NBPF11Q86T75 865 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 DHX37Q8IY37 1157 aaKnown RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 EYA3Q99504 573 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 DBNDD1Q9H9R9 158 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 RBM28Q9NW13 759 aaKnown RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 TTF2Q9UNY4 1162 aaKnown RBP9.86□□□□□ -0.83
CTNND1-215ENST00000526938 ATP2B4P23634 1241 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 USP17L2Q6R6M4 530 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 KRBA2Q6ZNG9 492 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 POLLQ9UGP5 575 aa9.86□□□□□ -0.83
CTNND1-215ENST00000526938 LRP6O75581 1613 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 SPATA31A6Q5VVP1 1343 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 ITGB4P16144 1822 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 PPP6R2O75170 966 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 MMP10P09238 476 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 SCG2P13521 617 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 CACNB3P54284 484 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 GOLGA8FQ08AF8 430 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 GOLGA8DPQ0D2H9 430 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 PTGDRQ13258 359 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 PTPAQ15257 358 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 DPP8Q6V1X1 898 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 KIAA0825Q8IV33 1275 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 DHX40Q8IX18 779 aaKnown RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 BLZF1Q9H2G9 400 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 FOXP1Q9H334 677 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 NHSL1Q5SYE7 1610 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 MYH14Q7Z406 1995 aaKnown RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 TNNT1P13805 278 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 IKQ13123 557 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 SOGA3Q5TF21 947 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 TMTC3Q6ZXV5 915 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 SMYD4Q8IYR2 804 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 LRRC47Q8N1G4 583 aaKnown RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 TRIM34Q9BYJ4 488 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CTNND1-215ENST00000526938 FRMPD2Q68DX3 1309 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-215ENST00000526938 TJP1Q07157 1748 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 POSTNQ15063 836 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 ZNF287Q9HBT7 754 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 FANCLQ9NW38 375 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PARP3Q9Y6F1 533 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 BBOX1O75936 387 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.831e-8■■■□□ 15.1
CTNND1-215ENST00000526938 NAPAP54920 295 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 FANCCQ00597 558 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 DDR1Q08345 913 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 C12orf60Q5U649 245 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 RBM43Q6ZSC3 357 aaKnown RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 MAP3K14Q99558 947 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 TMX1Q9H3N1 280 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 KLRF2D3W0D1 207 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PPEF1O14829 653 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 PRPF3O43395 683 aaKnown RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 INF2Q27J81 1249 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 CCDC96Q2M329 555 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 LETM2Q2VYF4 491 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 KIAA1524Q8TCG1 905 aa9.84□□□□□ -0.83
CTNND1-215ENST00000526938 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 SEC63Q9UGP8 760 aaKnown RBP9.84□□□□□ -0.83
CTNND1-215ENST00000526938 COL1A1P02452 1464 aaPredicted RBP9.84□□□□□ -0.84
CTNND1-215ENST00000526938 DOT1LQ8TEK3 1739 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 UBR2Q8IWV8 1755 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 TPM2P07951 284 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 PTPREP23469 700 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 CDK8P49336 464 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 PKN1Q16512 942 aa9.83□□□□□ -0.84
CTNND1-215ENST00000526938 JAKMIP3Q5VZ66 844 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms