RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 MEIS3Q99687 375 aa11.62□□□□□ -0.55
VIRMA-208ENST00000523263 TRIM34Q9BYJ4 488 aa11.62□□□□□ -0.55
VIRMA-208ENST00000523263 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
VIRMA-208ENST00000523263 STRNO43815 780 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 HLA-DOAP06340 250 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 CYBAP13498 195 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 SHHQ15465 462 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 ZNF512BQ96KM6 892 aaPredicted RBP11.61□□□□□ -0.55
VIRMA-208ENST00000523263 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 CWC22Q9HCG8 908 aaKnown RBP11.61□□□□□ -0.55
VIRMA-208ENST00000523263 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 AATFQ9NY61 560 aaKnown RBP eCLIP11.61□□□□□ -0.55
VIRMA-208ENST00000523263 PALD1Q9ULE6 856 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.61□□□□□ -0.55
VIRMA-208ENST00000523263 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
VIRMA-208ENST00000523263 GDF11O95390 407 aa11.6□□□□□ -0.55
VIRMA-208ENST00000523263 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
VIRMA-208ENST00000523263 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
VIRMA-208ENST00000523263 NPLOC4Q8TAT6 608 aa11.6□□□□□ -0.55
VIRMA-208ENST00000523263 EHD4Q9H223 541 aa11.6□□□□□ -0.55
VIRMA-208ENST00000523263 GH2P01242 217 aa11.59□□□□□ -0.55
VIRMA-208ENST00000523263 CNGA1P29973 690 aa11.59□□□□□ -0.55
VIRMA-208ENST00000523263 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
VIRMA-208ENST00000523263 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.554e-6■□□□□ 9.4
VIRMA-208ENST00000523263 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
VIRMA-208ENST00000523263 SHCBP1Q8NEM2 672 aa11.59□□□□□ -0.55
VIRMA-208ENST00000523263 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
VIRMA-208ENST00000523263 TTYH1Q9H313 450 aaPredicted RBP11.59□□□□□ -0.55
VIRMA-208ENST00000523263 BTBD7Q9P203 1132 aa11.59□□□□□ -0.55
VIRMA-208ENST00000523263 KBTBD13C9JR72 458 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 SEPT4O43236 478 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
VIRMA-208ENST00000523263 VCAM1P19320 739 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 CYP2C19P33261 490 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 C9orf50Q5SZB4 431 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 ADGRA1Q86SQ6 560 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 BADQ92934 168 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 NRBP1Q9UHY1 535 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 ATP11BQ9Y2G3 1177 aa11.58□□□□□ -0.56
VIRMA-208ENST00000523263 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
VIRMA-208ENST00000523263 GJC2Q5T442 439 aaPredicted RBP11.57□□□□□ -0.56
VIRMA-208ENST00000523263 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 ABRAQ8N0Z2 381 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 FEZ1Q99689 392 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 PDLIM7Q9NR12 457 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 SERPINB13Q9UIV8 391 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 TACC3Q9Y6A5 838 aa11.57□□□□□ -0.56
VIRMA-208ENST00000523263 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 TRIM43BA6NCK2 446 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 FOSL2P15408 326 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 ADORA2AP29274 412 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 COG2Q14746 738 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 LRRC41Q15345 812 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 TRIM60Q495X7 471 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
VIRMA-208ENST00000523263 TTC39AQ5SRH9 613 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 TRIM43Q96BQ3 446 aaPredicted RBP11.56□□□□□ -0.56
VIRMA-208ENST00000523263 CABP5Q9NP86 173 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 PHF24Q9UPV7 400 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 NDUFB9Q9Y6M9 179 aa11.56□□□□□ -0.56
VIRMA-208ENST00000523263 GNAI2P04899 355 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 RAB3GAP1Q15042 981 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 ABCB5Q2M3G0 1257 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 TJAP1Q5JTD0 557 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
VIRMA-208ENST00000523263 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 MROH8Q9H579 483 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 RPAP3Q9H6T3 665 aaPredicted RBP11.55□□□□□ -0.56
VIRMA-208ENST00000523263 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 SAP30BPQ9UHR5 308 aaKnown RBP11.55□□□□□ -0.56
VIRMA-208ENST00000523263 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
VIRMA-208ENST00000523263 PNMA6EA0A0J9YXQ4 647 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
VIRMA-208ENST00000523263 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
VIRMA-208ENST00000523263 KIAA0355O15063 1070 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 COBLO75128 1261 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 CYP7A1P22680 504 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 GUCY1A2P33402 732 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 ADCYAP1R1P41586 468 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
VIRMA-208ENST00000523263 DYNLL1P63167 89 aaKnown RBP11.54□□□□□ -0.56
VIRMA-208ENST00000523263 GABPAQ06546 454 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 ZYXQ15942 572 aaKnown RBP11.54□□□□□ -0.56
VIRMA-208ENST00000523263 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
VIRMA-208ENST00000523263 TOX2Q96NM4 488 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms