RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 DDAH1O94760 285 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 XBP1P17861 261 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ARID3AQ99856 593 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 FANCLQ9NW38 375 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 A0A087X0B3 334 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NPHP1O15259 732 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CALM1P0DP23 149 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CALM2P0DP24 149 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CALM3P0DP25 149 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ELOA2Q8IYF1 753 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 UBASH3AP57075 661 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NFIXQ14938 502 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GRIK5Q16478 980 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ARPP21Q9UBL0 812 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CTIFO43310 598 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SBK1Q52WX2 424 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 EPSTI1Q96J88 318 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TMEM232C9JQI7 657 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SERPINC1P01008 464 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 USP21Q9UK80 565 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SFPQP23246 707 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ZNF174Q15697 407 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 E4F1Q66K89 784 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SMARCE1Q969G3 411 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 HOOK1Q9UJC3 728 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 THSD7AQ9UPZ6 1657 aa12.31□□□□□ -0.44
RAB11FIP1-204ENST00000522774 RFC4P35249 363 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MORC3Q14149 939 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 DIXDC1Q155Q3 683 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 PTPN14Q15678 1187 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 DHX58Q96C10 678 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 INTS13Q9NVM9 706 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 UBAP1LF5GYI3 381 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MED15Q96RN5 788 aa12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MKRN1Q9UHC7 482 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CASP1P29466 404 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GRAPQ13588 217 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 LY75O60449 1722 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 EP400Q96L91 3159 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 LDHBP07195 334 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SCG2P13521 617 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MTERF4Q7Z6M4 381 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 SPATA20Q8TB22 786 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 BRMS1Q9HCU9 246 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 IL17RBQ9NRM6 502 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 AFMP43652 599 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TFAP4Q01664 338 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CCDC112Q8NEF3 446 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NFE2L3Q9Y4A8 694 aa12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP1-204ENST00000522774 CBFA2T2O43439 604 aa12.28□□□□□ -0.44
RAB11FIP1-204ENST00000522774 USP5P45974 858 aa12.28□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms