RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DPF2Q92785 391 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 MYH6P13533 1939 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 LDHBP07195 334 aaKnown RBP16.63■□□□□ 0.25
DDX41-208ENST00000507955 TNNT1P13805 278 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 PTPREP23469 700 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 USP5P45974 858 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 ZNF174Q15697 407 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
DDX41-208ENST00000507955 A0A087X0B3 334 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 PLCD1P51178 756 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 TFAP4Q01664 338 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 NAA30Q147X3 362 aaPredicted RBP16.63■□□□□ 0.25
DDX41-208ENST00000507955 NPY5RQ15761 445 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 TMTC3Q6ZXV5 915 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 TIGD1Q96MW7 591 aa16.63■□□□□ 0.25
DDX41-208ENST00000507955 AFF2P51816 1311 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
DDX41-208ENST00000507955 SKILP12757 684 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 CBX1P83916 185 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
DDX41-208ENST00000507955 TMC6Q7Z403 805 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 MTA3Q9BTC8 594 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
DDX41-208ENST00000507955 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
DDX41-208ENST00000507955 FAM237AA0A1B0GTK4 181 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 KRT2P35908 639 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 GOLGA8FQ08AF8 430 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 GOLGA8DPQ0D2H9 430 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
DDX41-208ENST00000507955 PDCL2Q8N4E4 241 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 STAMQ92783 540 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
DDX41-208ENST00000507955 CPVLQ9H3G5 476 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 GYS1P13807 737 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 CCZ1BP86790 482 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 CCZ1P86791 482 aaPredicted RBP16.61■□□□□ 0.25
DDX41-208ENST00000507955 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
DDX41-208ENST00000507955 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
DDX41-208ENST00000507955 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
DDX41-208ENST00000507955 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
DDX41-208ENST00000507955 ORC4O43929 436 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 UFL1O94874 794 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 AFMP43652 599 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 TPD52L1Q16890 204 aaPredicted RBP16.6■□□□□ 0.25
DDX41-208ENST00000507955 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
DDX41-208ENST00000507955 SMTNL1A8MU46 457 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 RCAN1P53805 252 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 FANCCQ00597 558 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 C12orf60Q5U649 245 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 TAF1LQ8IZX4 1826 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 RASGRP4Q8TDF6 673 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 DHX58Q96C10 678 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 BPIFA3Q9BQP9 254 aa16.6■□□□□ 0.25
DDX41-208ENST00000507955 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
DDX41-208ENST00000507955 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
DDX41-208ENST00000507955 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 SERPINB2P05120 415 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 POSTNQ15063 836 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 ARMCX5Q6P1M9 558 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 ZNF592Q92610 1267 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 MAN1B1Q9UKM7 699 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 UTRNP46939 3433 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 XDHP47989 1333 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 TRIM37O94972 964 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 GOLGA8HP0CJ92 632 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 FMR1Q06787 632 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX41-208ENST00000507955 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
DDX41-208ENST00000507955 XBP1P17861 261 aa16.58■□□□□ 0.25
DDX41-208ENST00000507955 CDC25AP30304 524 aa16.58■□□□□ 0.25
DDX41-208ENST00000507955 HSPA1LP34931 641 aa16.58■□□□□ 0.25
DDX41-208ENST00000507955 RBM28Q9NW13 759 aaKnown RBP16.58■□□□□ 0.25
DDX41-208ENST00000507955 STX8Q9UNK0 236 aa16.58■□□□□ 0.25
DDX41-208ENST00000507955 THSD7AQ9UPZ6 1657 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 COBLO75128 1261 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 DDAH1O94760 285 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 ZSCAN20P17040 1043 aaPredicted RBP16.58■□□□□ 0.24
DDX41-208ENST00000507955 NLRP5P59047 1200 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 SYMPKQ92797 1274 aaKnown RBP16.58■□□□□ 0.24
DDX41-208ENST00000507955 POLLQ9UGP5 575 aa16.58■□□□□ 0.24
DDX41-208ENST00000507955 PDS5AQ29RF7 1337 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms