RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 CTAGE5O15320 804 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ERCC3P19447 782 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 TROAPQ12815 778 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 WTAPQ15007 396 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ZNF174Q15697 407 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 USP17L2Q6R6M4 530 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 DIS3L2Q8IYB7 885 aaKnown RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 FMR1NBQ8N0W7 255 aaPredicted RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 STAG1Q8WVM7 1258 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ATRIPQ8WXE1 791 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 CD209Q9NNX6 404 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 MKRN1Q9UHC7 482 aaKnown RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 CTNNA3Q9UI47 895 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 DOCK2Q92608 1830 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 MYO15AQ9UKN7 3530 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 RGL2O15211 777 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ONECUT3O60422 494 aaPredicted RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 GTF2F1P35269 517 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 TFAP4Q01664 338 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 TRDNQ13061 729 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 GRAPQ13588 217 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 AOPEPQ8N6M6 819 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 FANCBQ8NB91 859 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 GRAPLQ8TC17 118 aaPredicted RBP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 ZNF622Q969S3 477 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 POLD4Q9HCU8 107 aa5.31□□□□□ -1.56
ATP2C1-212ENST00000507488 SCN7AQ01118 1682 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 CCDC69A6NI79 296 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 TMEM232C9JQI7 657 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RAD21O60216 631 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 IARSP41252 1262 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 BTDP43251 543 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 UBE4AQ14139 1066 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 MFSD14BQ5SR56 506 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 CCDC73Q6ZRK6 1079 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 CCDC186Q7Z3E2 898 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 DZIP1Q86YF9 867 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 HOMER1Q86YM7 354 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 KIAA0825Q8IV33 1275 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 LRRC47Q8N1G4 583 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 FBXL16Q8N461 479 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 CRACR2BQ8N4Y2 399 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ZSCAN10Q96SZ4 725 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RTFDC1Q9BY42 306 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 BCAS3Q9H6U6 928 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 FBXO3Q9UK99 471 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 TRPC5Q9UL62 973 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 MAPK8IP1Q9UQF2 711 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 GOLGA6L19H0YKK7 550 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 SLC16A2P36021 539 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 DPYDQ12882 1025 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RRP1BQ14684 758 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 IQCB1Q15051 598 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 STX1AQ16623 288 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ANO1Q5XXA6 986 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 TTBK2Q6IQ55 1244 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 METTL16Q86W50 562 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 TMX1Q9H3N1 280 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 STX8Q9UNK0 236 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ZBTB12Q9Y330 459 aaPredicted RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 SMCHD1A6NHR9 2005 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 PNPLA7Q6ZV29 1317 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ARAP2Q8WZ64 1704 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 SPTLC2O15270 562 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 KINO60870 393 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ZNF202O95125 648 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 EGFRP00533 1210 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RHBDL3P58872 404 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 STK38Q15208 465 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 ZRSR1Q15695 479 aaKnown RBP5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 RTN1Q16799 776 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 HPS3Q969F9 1004 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 BLZF1Q9H2G9 400 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 CLIP2Q9UDT6 1046 aa5.3□□□□□ -1.56
ATP2C1-212ENST00000507488 UBR3Q6ZT12 1888 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 DHX16O60231 1041 aaKnown RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 CDC25BP30305 580 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 FAM160A1Q05DH4 1040 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 FMR1Q06787 632 aaKnown RBP eCLIP5.29□□□□□ -1.562e-20■■■■■ 71.1
ATP2C1-212ENST00000507488 IFIT1BQ5T764 474 aaKnown RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 ZSCAN25Q6NSZ9 544 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 MTRQ99707 1265 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 DNAJC18Q9H819 358 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 TMEM260Q9NX78 707 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 LDHBP07195 334 aaKnown RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 LMOD1P29536 600 aaPredicted RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 AFMP43652 599 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 USP5P45974 858 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 CRY2Q49AN0 593 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 RC3H1Q5TC82 1133 aaKnown RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 SARM1Q6SZW1 724 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 PIK3AP1Q6ZUJ8 805 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 UBAC1Q9BSL1 405 aa5.29□□□□□ -1.56
ATP2C1-212ENST00000507488 CSRNP2Q9H175 543 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms