RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 IRF5Q13568 498 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 TREML2Q5T2D2 321 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 CCDC102BQ68D86 513 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 NECAB2Q7Z6G3 386 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
DHFR-202ENST00000504396 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.61
DHFR-202ENST00000504396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■■□□□ 13.2
DHFR-202ENST00000504396 PA2G4Q9UQ80 394 aaKnown RBP11.21□□□□□ -0.61
DHFR-202ENST00000504396 GAKO14976 1311 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
DHFR-202ENST00000504396 A0A1W2PPC1 479 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 SOX1O00570 391 aaPredicted RBP11.2□□□□□ -0.62
DHFR-202ENST00000504396 RASGRF1Q13972 1273 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 SPTY2D1Q68D10 685 aaPredicted RBP11.2□□□□□ -0.62
DHFR-202ENST00000504396 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 DDX4Q9NQI0 724 aaKnown RBP11.2□□□□□ -0.62
DHFR-202ENST00000504396 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
DHFR-202ENST00000504396 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
DHFR-202ENST00000504396 ATAD5Q96QE3 1844 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 MROH7-TTC4A0A0A0MT08 1334 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 SZT2Q5T011 3432 aa11.2□□□□□ -0.62
DHFR-202ENST00000504396 HMGCRP04035 888 aa11.19□□□□□ -0.62
DHFR-202ENST00000504396 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
DHFR-202ENST00000504396 PABPC4Q13310 644 aaKnown RBP eCLIP11.19□□□□□ -0.62
DHFR-202ENST00000504396 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
DHFR-202ENST00000504396 ALPK3Q96L96 1907 aa11.19□□□□□ -0.62
DHFR-202ENST00000504396 SYN1P17600 705 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 HMGCS2P54868 508 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 TIMM10P62072 90 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 SPP2Q13103 211 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 GSTO1P78417 241 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 MECOMQ03112 1051 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 NLRP7Q8WX94 980 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
DHFR-202ENST00000504396 RAI14Q9P0K7 980 aa11.18□□□□□ -0.62
DHFR-202ENST00000504396 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
DHFR-202ENST00000504396 KCNC4Q03721 635 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 TRIM32Q13049 653 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 CCAR1Q8IX12 1150 aaKnown RBP11.17□□□□□ -0.62
DHFR-202ENST00000504396 ANKLE1Q8NAG6 615 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 OSBPL5Q9H0X9 879 aaPredicted RBP11.17□□□□□ -0.62
DHFR-202ENST00000504396 ASCC2Q9H1I8 757 aaPredicted RBP11.17□□□□□ -0.62
DHFR-202ENST00000504396 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 COPRSQ9NQ92 184 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
DHFR-202ENST00000504396 RPTORQ8N122 1335 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 SRGAP3O43295 1099 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 LDHCP07864 332 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 CYP2B6P20813 491 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 TFCP2Q12800 502 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 MTMR2Q13614 643 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 TEX11Q8IYF3 940 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 PHOX2BQ99453 314 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 API5Q9BZZ5 524 aaKnown RBP11.16□□□□□ -0.62
DHFR-202ENST00000504396 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
DHFR-202ENST00000504396 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
DHFR-202ENST00000504396 NOB1Q9ULX3 412 aaKnown RBP11.16□□□□□ -0.62
DHFR-202ENST00000504396 DOCK3Q8IZD9 2030 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 RANBP2P49792 3224 aaKnown RBP11.15□□□□□ -0.62
DHFR-202ENST00000504396 RHBDL3P58872 404 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 Q7L0L9 218 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 MEIS3Q99687 375 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 MTRQ99707 1265 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 LRP2BPQ9P2M1 347 aa11.15□□□□□ -0.62
DHFR-202ENST00000504396 ZKSCAN1P17029 563 aaPredicted RBP11.14□□□□□ -0.63
DHFR-202ENST00000504396 CAP2P40123 477 aa11.14□□□□□ -0.63
DHFR-202ENST00000504396 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
DHFR-202ENST00000504396 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
DHFR-202ENST00000504396 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
DHFR-202ENST00000504396 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms