RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 MYH15Q9Y2K3 1946 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF536O15090 1300 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ONECUT3O60422 494 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 PDGFRBP09619 1106 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 SFPQP23246 707 aaKnown RBP eCLIP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ACTN2P35609 894 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 GJA8P48165 433 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 LONRF1Q17RB8 773 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 RABL6Q3YEC7 729 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ARHGAP29Q52LW3 1261 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 FAM182BQ5T319 152 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 AP1ARQ63HQ0 302 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 CWF19L1Q69YN2 538 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 DUS1LQ6P1R4 473 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TMCO3Q6UWJ1 677 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 KIAA0825Q8IV33 1275 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 CEP57L1Q8IYX8 460 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 NECAB1Q8N987 351 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 UPF1Q92900 1129 aaKnown RBP eCLIP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 FAM81BQ96LP2 452 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 CRACR2AQ9BSW2 395 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 FUT8Q9BYC5 575 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 LRRC2Q9BYS8 371 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 VPS33BQ9H267 617 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 SEMA4AQ9H3S1 761 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 DISP2A7MBM2 1401 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 CICQ96RK0 1608 aaPredicted RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 CREB3O43889 395 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 IDH1O75874 414 aaKnown RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 TRIM27P14373 513 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 PSMC1P62191 440 aaKnown RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 RASSF7Q02833 373 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 KIF4BQ2VIQ3 1234 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 C16orf71Q8IYS4 520 aaPredicted RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 VPS52Q8N1B4 723 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 FAM81AQ8TBF8 368 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 HPS3Q969F9 1004 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 NXPE3Q969Y0 559 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 UNC45AQ9H3U1 944 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 CNNM1Q9NRU3 951 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 KCND1Q9NSA2 647 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 SEPT11Q9NVA2 429 aaKnown RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 KLHL42Q9P2K6 505 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 RGPD2P0DJD1 1756 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 NCAPD2Q15021 1401 aa4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 EDC4Q6P2E9 1401 aaKnown RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 COL5A2P05997 1499 aaPredicted RBP4.15□□□□□ -1.74
PCDH11X-208ENST00000504220 GPR75-ASB3A0A0A6YYF3 556 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM83GA6ND36 823 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 PTCD1O75127 700 aaKnown RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 ATP2C2O75185 946 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 KIAA0754O94854 1291 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 POLR3DP05423 398 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 GNAT1P11488 350 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 IL4RP24394 825 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 PPP2R5BQ15173 497 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 TBC1D9Q6ZT07 1266 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 TXLNBQ8N3L3 684 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 ARMC2Q8NEN0 867 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC113Q9H0I3 377 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 PIDD1Q9HB75 910 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 HSFX1Q9UBD0 423 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 CIZ1Q9ULV3 898 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 ARIH1Q9Y4X5 557 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 ASB3Q9Y575 518 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 AFF2P51816 1311 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 A0A1W2PP64 1363 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 GFPT2O94808 682 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 MATR3P43243 847 aaKnown RBP eCLIP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 CDR1P51861 262 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 MCM6Q14566 821 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 AMOTL1Q8IY63 956 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC144CPQ8IYA2 1237 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 KCNH5Q8NCM2 988 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 JPH2Q9BR39 696 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 SNRKQ9NRH2 765 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 MAGEC2Q9UBF1 373 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 PAPPAQ13219 1627 aa4.15□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNF831Q5JPB2 1677 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ANKRD36BQ8N2N9 1353 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TRIM64CA6NLI5 447 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 SMTNL1A8MU46 457 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 MYO1BO43795 1136 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 LMAN1P49257 510 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNF165P49910 485 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ADCY1Q08828 1119 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 FOXB2Q5VYV0 432 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNF530Q6P9A1 599 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ESX1Q8N693 406 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ANKRD24Q8TF21 1146 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 PPM1EQ8WY54 764 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ACSBG1Q96GR2 724 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CDK5RAP3Q96JB5 506 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNF512BQ96KM6 892 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 LRRC27Q9C0I9 530 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNHIT6Q9NWK9 470 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC194A0A1B0GVG4 234 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms