RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 TRIM16LQ309B1 348 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 SPOUT1Q5T280 376 aaKnown RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 BLOC1S2Q6QNY1 142 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 NCAPG2Q86XI2 1143 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 NAPGQ99747 312 aaPredicted RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 SEPT3Q9UH03 358 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 KLHL20Q9Y2M5 609 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 PTGS1P23219 599 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 TNNI2P48788 182 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 CCDC85BQ15834 202 aaPredicted RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 NAIF1Q69YI7 327 aaPredicted RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 NECAB1Q8N987 351 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 LSM14BQ9BX40 385 aaKnown RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 CSRNP2Q9H175 543 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 PHAXQ9H814 394 aaKnown RBP6.03□□□□□ -1.44
PALMD-202ENST00000496843 LZTFL1Q9NQ48 299 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 ZSCAN32Q9NX65 697 aa6.03□□□□□ -1.44
PALMD-202ENST00000496843 GOLGA8HP0CJ92 632 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 KRT15P19012 456 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 PDE1BQ01064 536 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 UBE3AQ05086 875 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 GRAMD1BQ3KR37 738 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 ARHGAP22Q7Z5H3 698 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 NOSTRINQ8IVI9 506 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 TRIM45Q9H8W5 580 aaPredicted RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 RABL2AQ9UBK7 228 aaPredicted RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 CCDC162PA2VCL2 907 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 APOL1O14791 398 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 RGS16O15492 202 aaPredicted RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 SERPINB3P29508 390 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 APBA1Q02410 837 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 RPS6KA2Q15349 733 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 ZC3H12BQ5HYM0 836 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 C11orf88Q6PI97 169 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 MICALL2Q8IY33 904 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 AIPL1Q9NZN9 384 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 ATPIF1Q9UII2 106 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 RPH3AQ9Y2J0 694 aaPredicted RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 UTP11Q9Y3A2 253 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 CCDC189A1A4V9 331 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 STXBP3O00186 592 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 S100A6P06703 90 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 PDE6BP35913 854 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 MLH1P40692 756 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 SNAP25P60880 206 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 GRSF1Q12849 480 aaKnown RBP eCLIP6.02□□□□□ -1.45
PALMD-202ENST00000496843 TAF12Q16514 161 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 JADE1Q6IE81 842 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 DDHD1Q8NEL9 900 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 PPP4R1Q8TF05 950 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 THUMPD2Q9BTF0 503 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 PDCD10Q9BUL8 212 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 TUBB1Q9H4B7 451 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 TRPC7Q9HCX4 862 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 AFG3L2Q9Y4W6 797 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 EIF3CLB5ME19 914 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 HOXC8P31273 242 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 YWHAEP62258 255 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 RCN2Q14257 317 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 KAZNQ674X7 775 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 KANK3Q6NY19 840 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 FERMT3Q86UX7 667 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 CNGA4Q8IV77 575 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 RTL3Q8N8U3 475 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 FBXO18Q8NFZ0 1043 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 TBC1D5Q92609 795 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 CCDC42Q96M95 316 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 EIF3CQ99613 913 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 KIF17Q9P2E2 1029 aa6.02□□□□□ -1.45
PALMD-202ENST00000496843 DHX29Q7Z478 1369 aaKnown RBP6.02□□□□□ -1.45
PALMD-202ENST00000496843 EVC2Q86UK5 1308 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 TADA3O75528 432 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 ITIH3Q06033 890 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 TRIM69Q86WT6 500 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 CNDP1Q96KN2 507 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 PLIN2Q99541 437 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 RNPEPQ9H4A4 650 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 STRN4Q9NRL3 753 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.01□□□□□ -1.45
PALMD-202ENST00000496843 ATP6V0A2Q9Y487 856 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 BIN1O00499 593 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 GNGT2O14610 69 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 MYO1EQ12965 1108 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 SLFNL1Q499Z3 407 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 TMEM259Q4ZIN3 620 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 RUNDC3AQ59EK9 446 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 SRGAP1Q7Z6B7 1085 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 ANKRD42Q8N9B4 389 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 TDRD7Q8NHU6 1098 aaKnown RBP6.01□□□□□ -1.45
PALMD-202ENST00000496843 MYBBP1AQ9BQG0 1328 aaKnown RBP6.01□□□□□ -1.45
PALMD-202ENST00000496843 AP3B1O00203 1094 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 LZTS3O60299 673 aaPredicted RBP6.01□□□□□ -1.45
PALMD-202ENST00000496843 SPAG7O75391 227 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 PYGLP06737 847 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 PYGBP11216 843 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 TMOD1P28289 359 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 SMARCA1P28370 1054 aa6.01□□□□□ -1.45
PALMD-202ENST00000496843 HSPA9P38646 679 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms