RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 MYT1Q01538 1121 aa9.54□□□□□ -0.88
PALMD-202ENST00000496843 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
PALMD-202ENST00000496843 TTBK1Q5TCY1 1321 aaPredicted RBP9.07□□□□□ -0.96
PALMD-202ENST00000496843 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
PALMD-202ENST00000496843 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
PALMD-202ENST00000496843 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
PALMD-202ENST00000496843 CENPBP07199 599 aaPredicted RBP8.62□□□□□ -1.03
PALMD-202ENST00000496843 RANGAP1P46060 587 aaPredicted RBP8.5□□□□□ -1.05
PALMD-202ENST00000496843 GLIPR1L2Q4G1C9 344 aa8.39□□□□□ -1.07
PALMD-202ENST00000496843 NEFLP07196 543 aa8.37□□□□□ -1.07
PALMD-202ENST00000496843 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
PALMD-202ENST00000496843 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
PALMD-202ENST00000496843 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
PALMD-202ENST00000496843 ZEB1P37275 1124 aaPredicted RBP8.16□□□□□ -1.1
PALMD-202ENST00000496843 SLC24A1O60721 1099 aa8.09□□□□□ -1.12
PALMD-202ENST00000496843 ZNF316A6NFI3 1004 aaPredicted RBP8.06□□□□□ -1.12
PALMD-202ENST00000496843 POLR3GLQ9BT43 218 aa8.02□□□□□ -1.13
PALMD-202ENST00000496843 CLSPNQ9HAW4 1339 aa8□□□□□ -1.13
PALMD-202ENST00000496843 PCGF6Q9BYE7 350 aa7.96□□□□□ -1.13
PALMD-202ENST00000496843 MYT1LQ9UL68 1186 aa7.94□□□□□ -1.14
PALMD-202ENST00000496843 TNNT2P45379 298 aaPredicted RBP7.93□□□□□ -1.14
PALMD-202ENST00000496843 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.15
PALMD-202ENST00000496843 APLP2Q06481 763 aa7.88□□□□□ -1.15
PALMD-202ENST00000496843 DCAF8L2P0C7V8 631 aa7.87□□□□□ -1.15
PALMD-202ENST00000496843 EHMT2Q96KQ7 1210 aa7.84□□□□□ -1.15
PALMD-202ENST00000496843 ANP32BQ92688 251 aaKnown RBP7.81□□□□□ -1.16
PALMD-202ENST00000496843 ZNF326Q5BKZ1 582 aaKnown RBP7.8□□□□□ -1.16
PALMD-202ENST00000496843 NCLP19338 710 aaKnown RBP7.8□□□□□ -1.16
PALMD-202ENST00000496843 FAM9AQ8IZU1 332 aaPredicted RBP7.79□□□□□ -1.16
PALMD-202ENST00000496843 TRIM44Q96DX7 344 aaPredicted RBP7.77□□□□□ -1.17
PALMD-202ENST00000496843 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
PALMD-202ENST00000496843 SUPT5HO00267 1087 aaKnown RBP7.72□□□□□ -1.17
PALMD-202ENST00000496843 GTF3C3Q9Y5Q9 886 aa7.72□□□□□ -1.17
PALMD-202ENST00000496843 HRCP23327 699 aa7.71□□□□□ -1.18
PALMD-202ENST00000496843 ANP32AP39687 249 aaKnown RBP7.7□□□□□ -1.18
PALMD-202ENST00000496843 BCL11AQ9H165 835 aa7.7□□□□□ -1.18
PALMD-202ENST00000496843 CALRP27797 417 aaKnown RBP7.69□□□□□ -1.18
PALMD-202ENST00000496843 AMER1Q5JTC6 1135 aaPredicted RBP7.67□□□□□ -1.18
PALMD-202ENST00000496843 PTMSP20962 102 aa7.65□□□□□ -1.19
PALMD-202ENST00000496843 BCANQ96GW7 911 aa7.62□□□□□ -1.19
PALMD-202ENST00000496843 ERICH6BQ5W0A0 696 aa7.6□□□□□ -1.19
PALMD-202ENST00000496843 PODXL2Q9NZ53 605 aa7.58□□□□□ -1.2
PALMD-202ENST00000496843 NAP1L5Q96NT1 182 aaPredicted RBP7.56□□□□□ -1.2
PALMD-202ENST00000496843 TNNT3P45378 269 aaPredicted RBP7.55□□□□□ -1.2
PALMD-202ENST00000496843 NBR1Q14596 966 aa7.55□□□□□ -1.2
PALMD-202ENST00000496843 ANP32EQ9BTT0 268 aa7.54□□□□□ -1.2
PALMD-202ENST00000496843 DIEXFQ68CQ4 756 aaKnown RBP7.52□□□□□ -1.21
PALMD-202ENST00000496843 ACIN1Q9UKV3 1341 aaKnown RBP7.51□□□□□ -1.21
PALMD-202ENST00000496843 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
PALMD-202ENST00000496843 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
PALMD-202ENST00000496843 APPP05067 770 aa7.5□□□□□ -1.21
PALMD-202ENST00000496843 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
PALMD-202ENST00000496843 CNGB1Q14028 1251 aaPredicted RBP7.48□□□□□ -1.21
PALMD-202ENST00000496843 RTN4Q9NQC3 1192 aaKnown RBP7.48□□□□□ -1.21
PALMD-202ENST00000496843 ARXQ96QS3 562 aa7.46□□□□□ -1.21
PALMD-202ENST00000496843 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.22
PALMD-202ENST00000496843 NEFMP07197 916 aa7.45□□□□□ -1.22
PALMD-202ENST00000496843 DNTTIP2Q5QJE6 756 aaKnown RBP7.43□□□□□ -1.22
PALMD-202ENST00000496843 TRIM26Q12899 539 aaPredicted RBP7.43□□□□□ -1.22
PALMD-202ENST00000496843 VSIG10Q8N0Z9 540 aa7.42□□□□□ -1.22
PALMD-202ENST00000496843 PRKCSHP14314 528 aaPredicted RBP7.41□□□□□ -1.22
PALMD-202ENST00000496843 GOLGA6L22H0YM25 854 aa7.4□□□□□ -1.22
PALMD-202ENST00000496843 ATP1B4Q9UN42 357 aaPredicted RBP7.4□□□□□ -1.22
PALMD-202ENST00000496843 UPF2Q9HAU5 1272 aaKnown RBP7.4□□□□□ -1.22
PALMD-202ENST00000496843 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
PALMD-202ENST00000496843 PPARGC1BQ86YN6 1023 aaKnown RBP7.39□□□□□ -1.23
PALMD-202ENST00000496843 HAP1P54257 671 aaPredicted RBP7.37□□□□□ -1.23
PALMD-202ENST00000496843 PTMAP06454 111 aaKnown RBP7.37□□□□□ -1.23
PALMD-202ENST00000496843 STK11IPQ8N1F8 1099 aa7.37□□□□□ -1.23
PALMD-202ENST00000496843 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.36□□□□□ -1.23
PALMD-202ENST00000496843 C14orf37Q86TY3 774 aa7.34□□□□□ -1.23
PALMD-202ENST00000496843 ARID4BQ4LE39 1312 aaPredicted RBP7.33□□□□□ -1.24
PALMD-202ENST00000496843 PNNQ9H307 717 aaKnown RBP7.33□□□□□ -1.24
PALMD-202ENST00000496843 LAS1LQ9Y4W2 734 aaKnown RBP7.33□□□□□ -1.24
PALMD-202ENST00000496843 MEX3CQ5U5Q3 659 aaKnown RBP7.32□□□□□ -1.24
PALMD-202ENST00000496843 HSP90AA2PQ14568 343 aaPredicted RBP7.32□□□□□ -1.24
PALMD-202ENST00000496843 PPM1GO15355 546 aaPredicted RBP7.31□□□□□ -1.24
PALMD-202ENST00000496843 CHAF1AQ13111 956 aaPredicted RBP7.31□□□□□ -1.24
PALMD-202ENST00000496843 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
PALMD-202ENST00000496843 SETQ01105 290 aaPredicted RBP7.3□□□□□ -1.24
PALMD-202ENST00000496843 FKBP8Q14318 412 aa7.3□□□□□ -1.24
PALMD-202ENST00000496843 HMGB1P09429 215 aaKnown RBP7.29□□□□□ -1.24
PALMD-202ENST00000496843 DEKP35659 375 aaKnown RBP7.29□□□□□ -1.24
PALMD-202ENST00000496843 DDRGK1Q96HY6 314 aa7.29□□□□□ -1.24
PALMD-202ENST00000496843 NEFHP12036 1026 aa7.28□□□□□ -1.24
PALMD-202ENST00000496843 PDE4CQ08493 712 aa7.28□□□□□ -1.24
PALMD-202ENST00000496843 ANP32CO43423 234 aa7.27□□□□□ -1.25
PALMD-202ENST00000496843 HOMEZQ8IX15 550 aa7.27□□□□□ -1.25
PALMD-202ENST00000496843 RSPH6AQ9H0K4 717 aa7.26□□□□□ -1.25
PALMD-202ENST00000496843 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
PALMD-202ENST00000496843 MSNP26038 577 aaKnown RBP7.25□□□□□ -1.25
PALMD-202ENST00000496843 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
PALMD-202ENST00000496843 BECN1Q14457 450 aa7.24□□□□□ -1.25
PALMD-202ENST00000496843 ZNF526Q8TF50 670 aaPredicted RBP7.24□□□□□ -1.25
PALMD-202ENST00000496843 CCDC136Q96JN2 1154 aa7.24□□□□□ -1.25
PALMD-202ENST00000496843 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
PALMD-202ENST00000496843 L1TD1Q5T7N2 865 aaKnown RBP7.24□□□□□ -1.25
PALMD-202ENST00000496843 NRDCO43847 1150 aa7.23□□□□□ -1.25
PALMD-202ENST00000496843 SCAF1Q9H7N4 1312 aaKnown RBP7.22□□□□□ -1.25
PALMD-202ENST00000496843 ARID3AQ99856 593 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms