RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ADGRA1Q86SQ6 560 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 MAGEB6Q8N7X4 407 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 SPATA5Q8NB90 893 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 MTA3Q9BTC8 594 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 LIMCH1Q9UPQ0 1083 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 NUP98P52948 1817 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 AK9Q5TCS8 1911 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 QSER1Q2KHR3 1735 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 TAF1P21675 1872 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 CCNYL3P0C7X3 344 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 GYS1P13807 737 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 TM4SF1P30408 202 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 GJA5P36382 358 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF827Q17R98 1081 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 RC3H1Q5TC82 1133 aaKnown RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 FAM173BQ6P4H8 233 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 BRF1Q92994 677 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 NEK1Q96PY6 1258 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 NCAPGQ9BPX3 1015 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 MROH5Q6ZUA9 1318 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 TNNT1P13805 278 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 PDE6AP16499 860 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 SKOR1P84550 965 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 CUL4AQ13619 759 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 DNAJC21Q5F1R6 531 aaKnown RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF697Q5TEC3 545 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 PDGFDQ9GZP0 370 aaPredicted RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 ARMT1Q9H993 441 aa7.19□□□□□ -1.26
SSBP1-213ENST00000496622 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
SSBP1-213ENST00000496622 SPDYE5A6NIY4 337 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 JAK2O60674 1132 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 SLC5A1P13866 664 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 RPS6KB1P23443 525 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 PLA2G5P39877 138 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 RNF20Q5VTR2 975 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 PRR5LQ6MZQ0 368 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 Q6ZUG5 572 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 FERMT3Q86UX7 667 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 MSL3Q8N5Y2 521 aaKnown RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 CNBD1Q8NA66 436 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 FAM84BQ96KN1 310 aaPredicted RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 CDC5LQ99459 802 aaKnown RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 LRP2BPQ9P2M1 347 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 NSFL1CQ9UNZ2 370 aaKnown RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 COL24A1Q17RW2 1714 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 E7EWF7 191 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 SYT1P21579 422 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 ADD2P35612 726 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 DDR1Q08345 913 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 APOBRQ0VD83 1088 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 CHAF1AQ13111 956 aaPredicted RBP7.18□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 SDR42E1Q8WUS8 393 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 APPBP2Q92624 585 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 KCNB2Q92953 911 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 COL26A1Q96A83 441 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 UNC93B1Q9H1C4 597 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 HELLSQ9NRZ9 838 aa7.18□□□□□ -1.26
SSBP1-213ENST00000496622 SERPINB2P05120 415 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 RXRAP19793 462 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 GJB2P29033 226 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 TERF1P54274 439 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF384Q8TF68 577 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
SSBP1-213ENST00000496622 ANKIB1Q9P2G1 1089 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 RPAP1Q9BWH6 1393 aaPredicted RBP7.17□□□□□ -1.26
SSBP1-213ENST00000496622 TPD52L2O43399 206 aaKnown RBP7.17□□□□□ -1.26
SSBP1-213ENST00000496622 MARCH6O60337 910 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 MBD4O95243 580 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 PRDX5P30044 214 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 MCM2P49736 904 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 NR6A1Q15406 480 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 PTPRNQ16849 979 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
SSBP1-213ENST00000496622 LCORLQ8N3X6 602 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 IL17RAQ96F46 866 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 EVA1BQ9NVM1 165 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 BTAF1O14981 1849 aa7.17□□□□□ -1.26
SSBP1-213ENST00000496622 CYP2D7A0A087X1C5 515 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TCRBV5S4A2TA0A5A2 114 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 VPS37CA5D8V6 355 aaPredicted RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TDO2P48775 406 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 RBM5P52756 815 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 BIRC2Q13490 618 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 SETDB1Q15047 1291 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 SLC10A5Q5PT55 438 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 AIDAQ96BJ3 306 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TM6SF1Q9BZW5 370 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 GJB4Q9NTQ9 266 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 SMC3Q9UQE7 1217 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TACC3Q9Y6A5 838 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms