RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 SHROOM1Q2M3G4 852 aaPredicted RBP21.51■■□□□ 1.03
NPDC1-206ENST00000496498 OSBPP22059 807 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 GUCY1A2P33402 732 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 PDE4BQ07343 736 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 KIF22Q14807 665 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 SEPT2Q15019 361 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 C17orf99Q6UX52 265 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 CCDC129Q6ZRS4 1044 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 SH2D4AQ9H788 454 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
NPDC1-206ENST00000496498 GREB1LQ9C091 1923 aaPredicted RBP21.49■■□□□ 1.03
NPDC1-206ENST00000496498 AKR1B1P15121 316 aa21.49■■□□□ 1.03
NPDC1-206ENST00000496498 GSPT1P15170 499 aaKnown RBP21.49■■□□□ 1.03
NPDC1-206ENST00000496498 HOXA7P31268 230 aaPredicted RBP21.49■■□□□ 1.03
NPDC1-206ENST00000496498 TREML2Q5T2D2 321 aa21.49■■□□□ 1.03
NPDC1-206ENST00000496498 SMCR8Q8TEV9 937 aaPredicted RBP21.49■■□□□ 1.03
NPDC1-206ENST00000496498 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
NPDC1-206ENST00000496498 GNRH1P01148 92 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 PPARAQ07869 468 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 CCDC136Q96JN2 1154 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 MCOLN1Q9GZU1 580 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 KANSL2Q9H9L4 492 aa21.48■■□□□ 1.03
NPDC1-206ENST00000496498 FOXP2O15409 715 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 CYP2C8P10632 490 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 HSPD1P10809 573 aaKnown RBP21.47■■□□□ 1.03
NPDC1-206ENST00000496498 RASA1P20936 1047 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 GCLCP48506 637 aaPredicted RBP21.47■■□□□ 1.03
NPDC1-206ENST00000496498 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
NPDC1-206ENST00000496498 ICA1Q05084 483 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 GTF3C2Q8WUA4 911 aaPredicted RBP21.47■■□□□ 1.03
NPDC1-206ENST00000496498 EMILIN3Q9NT22 766 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 ANAPC4Q9UJX5 808 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 RAD50Q92878 1312 aa21.47■■□□□ 1.03
NPDC1-206ENST00000496498 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 BCRP11274 1271 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 LACTBP83111 547 aaPredicted RBP21.46■■□□□ 1.03
NPDC1-206ENST00000496498 CWC27Q6UX04 472 aaKnown RBP21.46■■□□□ 1.03
NPDC1-206ENST00000496498 ZNF589Q86UQ0 364 aaPredicted RBP21.46■■□□□ 1.03
NPDC1-206ENST00000496498 ZNF444Q8N0Y2 327 aaPredicted RBP21.46■■□□□ 1.03
NPDC1-206ENST00000496498 CD99L2Q8TCZ2 262 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 RUFY2Q8WXA3 655 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 EFCC1Q9HA90 598 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
NPDC1-206ENST00000496498 VPS53Q5VIR6 699 aa21.45■■□□□ 1.02
NPDC1-206ENST00000496498 FBXO46Q6PJ61 603 aaPredicted RBP21.45■■□□□ 1.02
NPDC1-206ENST00000496498 ACER1Q8TDN7 264 aa21.45■■□□□ 1.02
NPDC1-206ENST00000496498 LPAR1Q92633 364 aa21.45■■□□□ 1.02
NPDC1-206ENST00000496498 ASCC2Q9H1I8 757 aaPredicted RBP21.45■■□□□ 1.02
NPDC1-206ENST00000496498 TRIM17Q9Y577 477 aa21.45■■□□□ 1.02
NPDC1-206ENST00000496498 PLIN4Q96Q06 1357 aa21.45■■□□□ 1.02
NPDC1-206ENST00000496498 PCP11498 1178 aaKnown RBP21.44■■□□□ 1.02
NPDC1-206ENST00000496498 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
NPDC1-206ENST00000496498 PPP4R3BQ5MIZ7 849 aa21.44■■□□□ 1.02
NPDC1-206ENST00000496498 OTOP1Q7RTM1 612 aa21.44■■□□□ 1.02
NPDC1-206ENST00000496498 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
NPDC1-206ENST00000496498 TMX2Q9Y320 296 aa21.44■■□□□ 1.02
NPDC1-206ENST00000496498 LAMA4Q16363 1823 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L15C9J2P7 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L13C9JLJ4 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L11C9JVI0 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L18D6R9N7 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L22D6RA61 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L17D6RBQ6 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L19D6RCP7 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L20D6RJB6 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 FGAP02671 866 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 VCAM1P19320 739 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 NT5C2P49902 561 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 PRMT2P55345 433 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 USP17L24Q0WX57 530 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 ZYXQ15942 572 aaKnown RBP21.43■■□□□ 1.02
NPDC1-206ENST00000496498 ABHD8Q96I13 439 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 DSCC1Q9BVC3 393 aa21.43■■□□□ 1.02
NPDC1-206ENST00000496498 A0A1W2PRG0 241 aa21.42■■□□□ 1.02
NPDC1-206ENST00000496498 MGAMO43451 1857 aa21.42■■□□□ 1.02
NPDC1-206ENST00000496498 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
NPDC1-206ENST00000496498 NYAP2Q9P242 653 aa21.42■■□□□ 1.02
NPDC1-206ENST00000496498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.42■■□□□ 1.02
NPDC1-206ENST00000496498 ORC4O43929 436 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
NPDC1-206ENST00000496498 HOXD10P28358 340 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 FCGRTP55899 365 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 IFFO2Q5TF58 517 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 NEDD1Q8NHV4 660 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
NPDC1-206ENST00000496498 GOPCQ9HD26 462 aa21.41■■□□□ 1.02
NPDC1-206ENST00000496498 IGKV6D-41A0A0C4DH26 115 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 FGRP09769 529 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 TSPY3P0CV98 308 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 TSPY8P0CW00 308 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 HERVK_113P62684 666 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 CATSPERGQ6ZRH7 1159 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 SIAH1Q8IUQ4 282 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 STK11IPQ8N1F8 1099 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 ANKRD13CQ8N6S4 541 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 MORF4L1Q9UBU8 362 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 CTNNA3Q9UI47 895 aa21.4■■□□□ 1.02
NPDC1-206ENST00000496498 MYH4Q9Y623 1939 aa21.39■■□□□ 1.02
NPDC1-206ENST00000496498 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms