RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
SDCCAG3-211ENST00000486441 IGSF3O75054 1194 aa17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 CCDC158Q5M9N0 1113 aa17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 APBA2Q99767 749 aa17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L15C9J2P7 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L13C9JLJ4 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L11C9JVI0 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L18D6R9N7 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L22D6RA61 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L17D6RBQ6 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L19D6RCP7 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L20D6RJB6 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 HOXC6P09630 235 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 CYP7A1P22680 504 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 PTPREP23469 700 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 USP17L24Q0WX57 530 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 PDE3AQ14432 1141 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 LBX2Q6XYB7 198 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 MIGA1Q8NAN2 632 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 ANTXR1Q9H6X2 564 aa17.47■□□□□ 0.39
SDCCAG3-211ENST00000486441 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 SHMT1P34896 483 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 PLCD1P51178 756 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 EVX2Q03828 476 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 GUCD1Q96NT3 240 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 KIAA1683Q9H0B3 1180 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 EHD4Q9H223 541 aa17.46■□□□□ 0.39
SDCCAG3-211ENST00000486441 SLC15A5A6NIM6 579 aa17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 VCAM1P19320 739 aa17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 GRB14Q14449 540 aa17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 ZYXQ15942 572 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
SDCCAG3-211ENST00000486441 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 CYP2C19P33261 490 aa17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 GABPAQ06546 454 aa17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 FAM109BQ6ICB4 259 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
SDCCAG3-211ENST00000486441 MYH1P12882 1939 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 A0A1W2PRG0 241 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 LPAR1Q92633 364 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
SDCCAG3-211ENST00000486441 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 RLBP1P12271 317 aa17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 CYBAP13498 195 aa17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 COL25A1Q9BXS0 654 aaPredicted RBP17.42■□□□□ 0.38
SDCCAG3-211ENST00000486441 RLFQ13129 1914 aa17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 USP14P54578 494 aa17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 CCNA1P78396 465 aa17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 MOV10L1Q9BXT6 1211 aaKnown RBP17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 RPAP3Q9H6T3 665 aaPredicted RBP17.41■□□□□ 0.38
SDCCAG3-211ENST00000486441 COBLO75128 1261 aa17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 USP5P45974 858 aa17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 SEPT2Q15019 361 aa17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
SDCCAG3-211ENST00000486441 DNM1LO00429 736 aa17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 RTP1P59025 263 aa17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 GJC2Q5T442 439 aaPredicted RBP17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 ZKSCAN2Q63HK3 967 aa17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 TTC6Q86TZ1 520 aa17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 FEZ1Q99689 392 aa17.39■□□□□ 0.37
SDCCAG3-211ENST00000486441 MSCO60682 206 aa17.38■□□□□ 0.37
SDCCAG3-211ENST00000486441 SNX17Q15036 470 aa17.38■□□□□ 0.37
SDCCAG3-211ENST00000486441 C9orf50Q5SZB4 431 aa17.38■□□□□ 0.37
SDCCAG3-211ENST00000486441 WDR78Q5VTH9 848 aa17.38■□□□□ 0.37
SDCCAG3-211ENST00000486441 OLFML2BQ68BL8 750 aa17.38■□□□□ 0.37
SDCCAG3-211ENST00000486441 SMCHD1A6NHR9 2005 aa17.37■□□□□ 0.37
SDCCAG3-211ENST00000486441 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
SDCCAG3-211ENST00000486441 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
SDCCAG3-211ENST00000486441 ADORA2AP29274 412 aa17.37■□□□□ 0.37
SDCCAG3-211ENST00000486441 CNGA1P29973 690 aa17.37■□□□□ 0.37
SDCCAG3-211ENST00000486441 COG2Q14746 738 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms