RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 NBPF3Q9H094 633 aa35.02■■■■□ 3.2
HOXB3-208ENST00000476342 KANSL2Q9H9L4 492 aa35.02■■■■□ 3.2
HOXB3-208ENST00000476342 RBM8AQ9Y5S9 174 aaKnown RBP35.02■■■■□ 3.2
HOXB3-208ENST00000476342 C19orf81C9J6K1 198 aa35.01■■■■□ 3.2
HOXB3-208ENST00000476342 ALDH1A1P00352 501 aa35.01■■■■□ 3.2
HOXB3-208ENST00000476342 BACE1P56817 501 aa35.01■■■■□ 3.2
HOXB3-208ENST00000476342 MTMR2Q13614 643 aa35.01■■■■□ 3.2
HOXB3-208ENST00000476342 FEZ1Q99689 392 aa35.01■■■■□ 3.2
HOXB3-208ENST00000476342 PLIN4Q96Q06 1357 aa35■■■■□ 3.19
HOXB3-208ENST00000476342 TSPY2A6NKD2 308 aa35■■■■□ 3.19
HOXB3-208ENST00000476342 CA12O43570 354 aa35■■■■□ 3.19
HOXB3-208ENST00000476342 RANBP6O60518 1105 aaKnown RBP35■■■■□ 3.19
HOXB3-208ENST00000476342 ARHGEF10LQ9HCE6 1279 aa35■■■■□ 3.19
HOXB3-208ENST00000476342 INCENPQ9NQS7 918 aa35■■■■□ 3.19
HOXB3-208ENST00000476342 IGF2BP3O00425 579 aaKnown RBP eCLIP34.99■■■■□ 3.19
HOXB3-208ENST00000476342 NT5C2P49902 561 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 TFAP4Q01664 338 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 SH3D19Q5HYK7 790 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 RRP12Q5JTH9 1297 aaKnown RBP34.99■■■■□ 3.19
HOXB3-208ENST00000476342 PTPN18Q99952 460 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 TACC3Q9Y6A5 838 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 LOC285556D6RIA3 1793 aa34.99■■■■□ 3.19
HOXB3-208ENST00000476342 HMGCS2P54868 508 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 FAM47AQ5JRC9 791 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 GADL1Q6ZQY3 521 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 PROCA1Q8NCQ7 364 aaPredicted RBP34.98■■■■□ 3.19
HOXB3-208ENST00000476342 NEDD1Q8NHV4 660 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 USP14P54578 494 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.98■■■■□ 3.19
HOXB3-208ENST00000476342 SH2D4AQ9H788 454 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 ZCCHC17Q9NP64 241 aaKnown RBP34.98■■■■□ 3.19
HOXB3-208ENST00000476342 SAGE1Q9NXZ1 904 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 TMOD4Q9NZQ9 345 aa34.98■■■■□ 3.19
HOXB3-208ENST00000476342 BTBD19C9JJ37 291 aa34.97■■■■□ 3.19
HOXB3-208ENST00000476342 CYP21A2P08686 494 aa34.97■■■■□ 3.19
HOXB3-208ENST00000476342 MOGSQ13724 837 aa34.97■■■■□ 3.19
HOXB3-208ENST00000476342 KIAA1683Q9H0B3 1180 aa34.97■■■■□ 3.19
HOXB3-208ENST00000476342 RNF186Q9NXI6 227 aa34.97■■■■□ 3.19
HOXB3-208ENST00000476342 REC8O95072 547 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 HSPA1AP0DMV8 641 aaKnown RBP34.96■■■■□ 3.19
HOXB3-208ENST00000476342 HSPA1BP0DMV9 641 aaKnown RBP34.96■■■■□ 3.19
HOXB3-208ENST00000476342 USP17L2Q6R6M4 530 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 ANKRD23Q86SG2 305 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 CLEC10AQ8IUN9 316 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 ACER1Q8TDN7 264 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 ESR2Q92731 530 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 CNNM2Q9H8M5 875 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 NEDD4P46934 1319 aa34.96■■■■□ 3.19
HOXB3-208ENST00000476342 TRPA1O75762 1119 aa34.95■■■■□ 3.19
HOXB3-208ENST00000476342 PPP4R3BQ5MIZ7 849 aa34.95■■■■□ 3.19
HOXB3-208ENST00000476342 FAM43AQ8N2R8 423 aa34.95■■■■□ 3.19
HOXB3-208ENST00000476342 IGKV6D-41A0A0C4DH26 115 aa34.94■■■■□ 3.18
HOXB3-208ENST00000476342 EEF2P13639 858 aaKnown RBP34.94■■■■□ 3.18
HOXB3-208ENST00000476342 ATP2B2Q01814 1243 aa34.94■■■■□ 3.18
HOXB3-208ENST00000476342 KRT23Q9C075 422 aa34.94■■■■□ 3.18
HOXB3-208ENST00000476342 AGTPBP1Q9UPW5 1226 aa34.94■■■■□ 3.18
HOXB3-208ENST00000476342 ZYXQ15942 572 aaKnown RBP34.93■■■■□ 3.18
HOXB3-208ENST00000476342 CEP95Q96GE4 821 aa34.93■■■■□ 3.18
HOXB3-208ENST00000476342 NYAP2Q9P242 653 aa34.93■■■■□ 3.18
HOXB3-208ENST00000476342 MYH4Q9Y623 1939 aa34.93■■■■□ 3.18
HOXB3-208ENST00000476342 A0A1W2PRG0 241 aa34.92■■■■□ 3.18
HOXB3-208ENST00000476342 TRDNQ13061 729 aa34.92■■■■□ 3.18
HOXB3-208ENST00000476342 MTMR4Q9NYA4 1195 aa34.92■■■■□ 3.18
HOXB3-208ENST00000476342 TMX2Q9Y320 296 aa34.92■■■■□ 3.18
HOXB3-208ENST00000476342 RNF20Q5VTR2 975 aa34.91■■■■□ 3.18
HOXB3-208ENST00000476342 GPAT2Q6NUI2 795 aa34.91■■■■□ 3.18
HOXB3-208ENST00000476342 SIAH1Q8IUQ4 282 aa34.91■■■■□ 3.18
HOXB3-208ENST00000476342 C12orf42Q96LP6 360 aa34.91■■■■□ 3.18
HOXB3-208ENST00000476342 SLC45A1Q9Y2W3 748 aa34.91■■■■□ 3.18
HOXB3-208ENST00000476342 PDHXO00330 501 aa34.9■■■■□ 3.18
HOXB3-208ENST00000476342 TTLL1O95922 423 aa34.9■■■■□ 3.18
HOXB3-208ENST00000476342 PABPC4Q13310 644 aaKnown RBP eCLIP34.9■■■■□ 3.18
HOXB3-208ENST00000476342 DGKZQ13574 1117 aa34.9■■■■□ 3.18
HOXB3-208ENST00000476342 NECTIN1Q15223 517 aa34.9■■■■□ 3.18
HOXB3-208ENST00000476342 TAF1CQ15572 869 aaPredicted RBP34.9■■■■□ 3.18
HOXB3-208ENST00000476342 EMILIN3Q9NT22 766 aa34.9■■■■□ 3.18
HOXB3-208ENST00000476342 CFHR5Q9BXR6 569 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 B4E1Z4 1266 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 KDM4AO75164 1064 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 TREML2Q5T2D2 321 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 CREB3L3Q68CJ9 461 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 TCP11L1Q9NUJ3 509 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 CLIP2Q9UDT6 1046 aa34.89■■■■□ 3.18
HOXB3-208ENST00000476342 E7EWF7 191 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 SLC27A2O14975 620 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 VCPKMTQ9H867 229 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 GOPCQ9HD26 462 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 PNMA3Q9UL41 463 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 SYNPO2Q9UMS6 1093 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 STX8Q9UNK0 236 aa34.88■■■■□ 3.17
HOXB3-208ENST00000476342 EPB41L2O43491 1005 aaKnown RBP34.87■■■■□ 3.17
HOXB3-208ENST00000476342 EIF5BO60841 1220 aaKnown RBP34.87■■■■□ 3.17
HOXB3-208ENST00000476342 RALYLQ86SE5 291 aaKnown RBP34.87■■■■□ 3.17
HOXB3-208ENST00000476342 IQCA1Q86XH1 822 aa34.87■■■■□ 3.17
HOXB3-208ENST00000476342 LPAR1Q92633 364 aa34.87■■■■□ 3.17
HOXB3-208ENST00000476342 PARK7Q99497 189 aaKnown RBP34.87■■■■□ 3.17
HOXB3-208ENST00000476342 ZFYVE28Q9HCC9 887 aa34.87■■■■□ 3.17
HOXB3-208ENST00000476342 IL17RBQ9NRM6 502 aa34.87■■■■□ 3.17
HOXB3-208ENST00000476342 FOXN1O15353 648 aa34.86■■■■□ 3.17
HOXB3-208ENST00000476342 NCOA7Q8NI08 942 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms